Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00867 ATGGCGACACATGACATGGATCCTGATGTTGTTCGCTGGGGTCTTCACCTTCTAGATGTTTGCACGCTTTCCCATCATGGTTCGCCTAGTATTCTTACCCAGTATGATCCTGATTTTAGTCGAGTTGAATATGTCAGAGAAGGATTCTGTCAGCATGAGTATGTGGAGAATGACGAGGCTGTTGCACGAGCTTATCAAGAAGAATTATCACAACTTGACTCCATGGGAGCTTCTGGGACACCCAGTTATCAGAATGAGGGAATGCAAGGATCTGTCTATACACAAGATTGGCCTCATTCTTCAAATGGAAACTATAATTACGGAAACGAGTCTTGTCAGAACTCTGTAGATGAGTCATCGTACAATATGAAAGATGTGGAGAATTATGGTCCAAGTGAAAGGGGAAATGATATGCATGACATTCATGTTTTTGGTTCCTCTGGGTCAGGAGAGGTACCTGTTGCTAGAGATGATGTCTGGGATTCATTGGAAATATCAGACGAATCTTCTCTTGATGGCGAAGTTGGCAAAAGATTATACCAGATGGTTCCCATCCCCCATATTCCTAAAACCAATGAAAAAATACCATCTGATGACGAAGAGACATCAGATCATCAAAGGCTTCTAGACAGATTGCAGTTATATGATCTGATTGAGAATAAGGTTCAAGGAGATGGTAACTGCCAGTTCCGTTCTTTGTCAGACCAGCTCTATCGATCTCCAGACCATCACCAATTTGTGCGGGAGCAGATTATTCAACAGCTCAAATCTTCCCCAGATCTGTATTCTGGTTATGTTCCCATGGGTTATAGTGATTATTTGAAGAAGATGAGCAAGAGTGGTGAATGGGGTGATCATGTCACATTGCAGGCGGCTGCAGATTGGTATGGTGTCAAAATTCTTGTTATTACATCTTTTAAGGACACGTGTTACATAGAGATTCTTCCACAGATACAGAAGTCTGGAAGAGTGATATTTCTGAGCTTTTGGGCAGAGGTGCATTACAACTCAATCTATCCAGAAGGAGAATTGCCCTCATTTCAGACCAGGAAAAAGAAGAAATGGTGGAATTTTGGTGCTTAG 1083 0.4201 MATHDMDPDVVRWGLHLLDVCTLSHHGSPSILTQYDPDFSRVEYVREGFCQHEYVENDEAVARAYQEELSQLDSMGASGTPSYQNEGMQGSVYTQDWPHSSNGNYNYGNESCQNSVDESSYNMKDVENYGPSERGNDMHDIHVFGSSGSGEVPVARDDVWDSLEISDESSLDGEVGKRLYQMVPIPHIPKTNEKIPSDDEETSDHQRLLDRLQLYDLIENKVQGDGNCQFRSLSDQLYRSPDHHQFVREQIIQQLKSSPDLYSGYVPMGYSDYLKKMSKSGEWGDHVTLQAAADWYGVKILVITSFKDTCYIEILPQIQKSGRVIFLSFWAEVHYNSIYPEGELPSFQTRKKKKWWNFGA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00867 360 SUPERFAMILY Cysteine proteinases 201 340 IPR038765 -
Vian3g00867 360 CDD OTU_plant_OTU9-like 208 339 - -
Vian3g00867 360 FunFam OTU domain-containing protein 199 345 - -
Vian3g00867 360 Gene3D - 197 344 - -
Vian3g00867 360 PANTHER OTU DOMAIN CONTAINING PROTEIN 55 342 - -
Vian3g00867 360 ProSiteProfiles OTU domain profile. 217 341 IPR003323 -
Vian3g00867 360 Pfam OTU-like cysteine protease 223 309 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00867 Vian-Chr3 9301544 9308346 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00867 - - gmx:100820379 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02371 2 44128692 44132670 Vian3g00867 3 9301544 9308346 ECH
Vian3g01607 3 17685565 17688661 Vian3g00867 3 9301544 9308346 ECH
Vian3g00867 3 9301544 9308346 Vian3g00867 3 9301544 9308346 ECH