Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02466 ATGCAGAGTGAGCAACAGAGCAACAACAACAACCAGTTGGTAGTGCAGAATTCGGGGAGTCTGAGCTTCAGCAGCCATTTGTCGAAGGAAGATGAAGAGATGTCCAGGTCTGCTCTTTCCACCTTCAGGGCCAAGGAGGAAGAGATTGAAAGGAAGAAGATGGAGGTCAGAGAAAAGGTTCAGCTTCAGTTGGGTCGCGTTGAGGAAGAAACCAAACGTCTTGCCACCATTCGTGAGTCGAGTTATGTTGTAACAAGGAGAACTACAGAGGCTTGGAGAACATGTAGAGCTCTTGAATATGCCCGATCTGTGGAGCTGGAAGCCCTGGCAGATCCAATGAGGAAAGAAGTTGCACTTGTTCGAAAAAGGATCGATTCCGTAAACAAAGAATTAAAGCCACTGGGTCATGCCTGCCAGAAGAAGGAGAAAGAATACAAAGACGCTCTCGAAGCTTTTAATGAAAAGAACAGGGAAAAAGTACAGCTAATCACCAAGTTAATGGAGTTGGTGAGTGAAAGTGAAAGATTGAGGATGAAGAAGCTGGAGGAGCTGAGCAAGAACGTAGATTCGATGCAATGA 579 0.4577 MQSEQQSNNNNQLVVQNSGSLSFSSHLSKEDEEMSRSALSTFRAKEEEIERKKMEVREKVQLQLGRVEEETKRLATIRESSYVVTRRTTEAWRTCRALEYARSVELEALADPMRKEVALVRKRIDSVNKELKPLGHACQKKEKEYKDALEAFNEKNREKVQLITKLMELVSESERLRMKKLEELSKNVDSMQ 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02466 192 Coils Coil 138 158 - -
Vian2g02466 192 PANTHER RAB6-INTERACTING PROTEIN GORAB 4 79 IPR007033 -
Vian2g02466 192 Pfam Transcriptional activator 104 190 IPR007033 -
Vian2g02466 192 Pfam Transcriptional activator 16 81 IPR007033 -
Vian2g02466 192 Coils Coil 39 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02466 Vian-Chr2 45230273 45231857 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02466 - - gmx:100499923 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02466 2 45230273 45231857 Vian3g00925 3 10081551 10082709 ECH
Vian2g02466 2 45230273 45231857 Vian2g02466 2 45230273 45231857 ECH
Vian2g02466 2 45230273 45231857 Vian5g01063 5 32372384 32374244 ECH