Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01063 ATGGCAACACCAAAACAGCCATATGAGCAACACCAACAACAAACAAATGTGCAGCGTGTGAGAAATTCAGGGATGATTAACGTCAACCAGAGTCCAATGAGGGATGACAAGGAAGAGGAGATGTCAAGATCAGCTTTGGCAATGTTCAGAGCAAAGGAAGAAGAAATTGAGAGGAAGAAAATGGAGGTGAGGGATAAGGTTCACGCTTATCTGGGTCGAGTAGAGGAGGAAACAAAACGCTTGGCTGAGATTAGAGAAGAGCTTGAGGGTCTGACAGATCCATTGAGGAAGGAAGTTGCAATGGTTAGAAAGAAGATAGACAGTGTGAACAAAGAGTTAAAGCCACTGGGCCAAACCTGCCAGAGAAAGGAAAAAGAATATAAGGAAGCCCTTGATGCTTTCAATGAGAAAAACAAGGAAAAAGCTCAACTTGTTACCAAACTAATGGAGCTGGTGACTGAAAGTGAGAAGTTGAGGATGAAGAAGTTGGAGGAGTTAAGCAAAAACGTAGATACCCTGAACTGA 525 0.4286 MATPKQPYEQHQQQTNVQRVRNSGMINVNQSPMRDDKEEEMSRSALAMFRAKEEEIERKKMEVRDKVHAYLGRVEEETKRLAEIREELEGLTDPLRKEVAMVRKKIDSVNKELKPLGQTCQRKEKEYKEALDAFNEKNKEKAQLVTKLMELVTESEKLRMKKLEELSKNVDTLN 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01063 174 Coils Coil 67 87 - -
Vian5g01063 174 MobiDBLite consensus disorder prediction 1 42 - -
Vian5g01063 174 Coils Coil 120 140 - -
Vian5g01063 174 PANTHER RAB6-INTERACTING PROTEIN GORAB 6 171 IPR007033 -
Vian5g01063 174 MobiDBLite consensus disorder prediction 1 30 - -
Vian5g01063 174 Pfam Transcriptional activator 21 172 IPR007033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01063 Vian-Chr5 32372384 32374244 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01063 - - gmx:100499699 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01063 5 32372384 32374244 Vian5g01063 5 32372384 32374244 ECH
Vian2g02466 2 45230273 45231857 Vian5g01063 5 32372384 32374244 ECH