Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00925 ATGGGCTTAGTTTGCAGCAGCAGAGAGGAAATGCAGAAAATGAAGAACCTTGGCAGCATTGGAAGCAGTGGGAGGCTATCAGCAGAAGAGTATGAGGATGAGGATATTTCAAAGCTCGCCATCTCCACGTTTCAGTCTAAGGAAGAAGAAATTGAGAGGAAAAAAATGGAGGTGAGAGAGAAAGTTGAACTCCAACTTGGTCGTGCTGAAGAAGAGACTAGGCGCTTGGCACACATTTGGGAAGAGCTTGAAGTGCTTGATGATCCCATGAGGAAGGAAGTTGCAATGTTACGCAAGAAGATTGACTTGGCTAACAGAGATTTGAAGCCACTGGGACTTAACTACCAGAAAAAGGAGAAAGAGTGTAAAGAAGCCTTGGAAGCTTTCAACGAAAAAAACAAAGAGAAGACTCATCTGGTTGCTACACTAGTTGAGATGCTGACTGAGAGTGAAAGAATGAGGATGAAGAAACTGGACGAGCTATGCAAGACAATAGAGTCTCTGTCTTTGAAACCATAA 519 0.4335 MGLVCSSREEMQKMKNLGSIGSSGRLSAEEYEDEDISKLAISTFQSKEEEIERKKMEVREKVELQLGRAEEETRRLAHIWEELEVLDDPMRKEVAMLRKKIDLANRDLKPLGLNYQKKEKECKEALEAFNEKNKEKTHLVATLVEMLTESERMRMKKLDELCKTIESLSLKP 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00925 172 Coils Coil 115 135 - -
Vian3g00925 172 Pfam Transcriptional activator 15 167 IPR007033 -
Vian3g00925 172 Coils Coil 41 61 - -
Vian3g00925 172 PANTHER RAB6-INTERACTING PROTEIN GORAB 9 167 IPR007033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00925 Vian-Chr3 10081551 10082709 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00925 - - gmx:100794044 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02466 2 45230273 45231857 Vian3g00925 3 10081551 10082709 ECH
Vian3g00925 3 10081551 10082709 Vian3g00925 3 10081551 10082709 ECH