Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01871 ATGATGGGATCAGAAACAGAGAAGAGAAAATCTCTACCTATTATTGATTTGAGTGATGAAAAGATGAAACCTGGTACTCAAACATGGGTTTCCACTTCTGATGCTGTGAGGAGTGCCTTAGAGGATCACGGTGGATTCCTTGCACACTACAATAAGGTTGATCAAATGCTTACTGACTCTGTCTTCTCTGCAATGAAAGAACTCTTTGACCTTCCATTAGAGACAAAAATGCAGCAGACAACTGATAAACCTATCTATAGCTACGCTGGACAACGCCCTGATATTCCTTTGTATGAATCCATGGCCATCGATAACCCATTGAATGCTAAAACTTGTCACAAGTATGCAACCATTATGTGGCCACAAGGGAACCACCAATTCAGTGAAAGTGTGAATAGCTATGCAAAGAAAGTTGCAGAACTGGATTATACTGTTAAGAGAATGGTGTTTGGGAGCTATGGATTGGAGAATGAGAAATGTGAGCGTTTGGTTGAATCAACGGATTATGTTCTGAGATGCTACAAATATAGAACACCTAAGACAGGTGAGACCAACTTAGGAGTGCGTGCTCATACAGATTCTGGCTTCCTTACAATATTGAATCAGAGGTTAAATGGCTTAGAAGTTCAGTTGAAGAATGGAGAGTGGTTCCAGGTTGATGCCTCTCCCTCCATCTTTGCTGTCTTGGCTGGTGATGCATTTATGGTATGGAGCAATGACAGAATACGTGGTTGTGTACACAGAGTATTCATGAATTCAAAGGTAGAGAGATTCAGTTTGGGGCTGCTTTCATATGCTGGAAAGGTGATGGAACCTGAGGAAAAATTAGTGGATGAAGAACACCCTCTTCGTTATAAACCATTTGACCATTATGGATATCTTCGTTTCTTCCTCACAGAAGAGGCTGTCAAAGCTTCTTCTAGGATCAAGGCATATTGTGGTATTTGA 948 0.4103 MMGSETEKRKSLPIIDLSDEKMKPGTQTWVSTSDAVRSALEDHGGFLAHYNKVDQMLTDSVFSAMKELFDLPLETKMQQTTDKPIYSYAGQRPDIPLYESMAIDNPLNAKTCHKYATIMWPQGNHQFSESVNSYAKKVAELDYTVKRMVFGSYGLENEKCERLVESTDYVLRCYKYRTPKTGETNLGVRAHTDSGFLTILNQRLNGLEVQLKNGEWFQVDASPSIFAVLAGDAFMVWSNDRIRGCVHRVFMNSKVERFSLGLLSYAGKVMEPEEKLVDEEHPLRYKPFDHYGYLRFFLTEEAVKASSRIKAYCGI 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01871 315 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 4 302 - -
Vian2g01871 315 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 12 293 - -
Vian2g01871 315 Pfam 2OG-Fe(II) oxygenase superfamily 176 260 IPR044861 -
Vian2g01871 315 Pfam non-haem dioxygenase in morphine synthesis N-terminal 12 88 IPR026992 -
Vian2g01871 315 SUPERFAMILY Clavaminate synthase-like 10 300 - -
Vian2g01871 315 Gene3D - 10 313 IPR027443 -
Vian2g01871 315 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 166 271 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01871 Vian-Chr2 37609867 37611718 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01871 134 286 Glycosyltransferase AT5G59530 26.875 1.12e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01871 - - gmx:100817683 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01871 2 37609867 37611718 Vian3g02415 3 37484103 37485203 PCT
Vian3g02414 3 37479442 37481908 Vian2g01871 2 37609867 37611718 PCT