Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02414 ATGGGTTCTGAAGAACATCCTATGATTCCTGTTCTAGATTTCACCATGGAAGATTTGAAGCCAGGGAGCGATTCCTGGTTAGAAAGATGCACAAGTGTGCGGCAAGCACTTGAAGAACATGGTTGTTTTGTAGCTGTGTATGATAAAGTTTGTGATGAGCTAGAAAACGGTGTTTTCTGCTCCATGAAGGAGCTGTTCGATCTCTCACCTGAAACCAAACGAAGAAACACATATGAGGGTTCGCCATTGAAGGGCTACGTTGGACAACTCCCCCAGATTCCCCTCCACCAAAGCATGGGAATAGATGACGGAACAACCCTAGAGGGAATTCAAAGCTTTACTCATCAAATGTGGCCAAAAGGCAATCATCACTTTTGTAAATATATATTTGAGTATGCAAAGGTAGCAGAAGAATTGGACAAGATGGTGGGCAGAATGATATTTGAAAGTTATGGTCTTCCAGATTACTATGAGTCATACATGCGATCTACAGGTTATCTCCTTAGACTTTTGGCACACACAGCACCAGAAGAGGTTGAGCCTCAACTGGGTCTTGTGGCTCACACTGACAAGAGCTTCACCACAATTCTTCACCAAAATCATGTCAATGCACTCATGGTTGAGACAAGGAATGGTGTCTGGATTCATGTCGATTTCTCTTCAACAAATTCCTTTGTCGTCATGGCTGGTGATGGACTCATGGCTTGGAGCAATGACAGAATACAGTCCCCTAATCATAAGGTTGTGATGAATGGGAATGAAACAAGGTACTCTCTTGGTCTGTTTGCTTTCTACAAAGGAATTCTGATAGTGCCTGAAGAGCTTATTGATGAAGAACATCCAGTGCAGTATAAGCCCTTTGATCATCTTGGATTACTAAACTTCACTTACAGTGCTAATATGAAAGCTTATTGTGGTGTGTGA 924 0.4232 MGSEEHPMIPVLDFTMEDLKPGSDSWLERCTSVRQALEEHGCFVAVYDKVCDELENGVFCSMKELFDLSPETKRRNTYEGSPLKGYVGQLPQIPLHQSMGIDDGTTLEGIQSFTHQMWPKGNHHFCKYIFEYAKVAEELDKMVGRMIFESYGLPDYYESYMRSTGYLLRLLAHTAPEEVEPQLGLVAHTDKSFTTILHQNHVNALMVETRNGVWIHVDFSSTNSFVVMAGDGLMAWSNDRIQSPNHKVVMNGNETRYSLGLFAFYKGILIVPEELIDEEHPVQYKPFDHLGLLNFTYSANMKAYCGV 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02414 307 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 289 - -
Vian3g02414 307 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 88 IPR026992 -
Vian3g02414 307 Pfam 2OG-Fe(II) oxygenase superfamily 172 263 IPR044861 -
Vian3g02414 307 SUPERFAMILY Clavaminate synthase-like 8 301 - -
Vian3g02414 307 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 162 265 IPR005123 -
Vian3g02414 307 Gene3D - 1 299 IPR027443 -
Vian3g02414 307 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02414 Vian-Chr3 37479442 37481908 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02414 129 285 Glycosyltransferase AT5G59530 29.091 2.38e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02414 - - vum:124839683 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02414 3 37479442 37481908 Vian2g01871 2 37609867 37611718 PCT