Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02415 ATGATGGAAAGTGTAGGTGAAAATCCCCTTCCTGTTGTTGACTTCTCGAACGAAAATATGAAGCCTGGCACTGATACATGGGTTGCAGCATGTGAAATGGTGCGGAGAGGATTTGAGGATCACGGTTGTTTCCTAGCACACTTCGACAAGGTTGCTCCAAACCTTATAAACTCCGTTTTCTGTGCAATGGAACAACTCTTTGATCTTCCACTGCAAACCAAAAGGAGAAAAACCAGTGACAAACCCAACCATGGCTACACTGGACAAGTACCCACCTCCCCTCTTTTCGAATCCTTTGCCATTCATAATCCATCCAACCGTAAACATTGTCAAAACTTCTCAAACATTATGTGGCCAACAGGAAATCATCATTTGTGTGAAAGTGTGAACGAGTATGCCAAGTTATTACAAGAGCTGGACCGAACGGTGAAGAGAGTGGTGTTTGATAGCTATGGCCTGGACAAGGTGAAATGCGAGTCGTTCCTGGAATCAACCGATTATAGTTTTCGCAGCTACAAATACAAGATACCTGCGATGGATGAGAGCAACGTGGGAGTGAATTCTCATACGGATTCAACATTTATAACCATATTGCATCAGAGGGTAGATGGATTGGAAGTTAAATTGAAAGATGGAGAATGGTCTGCTATTCATGCCTCACCTTTGTTTTGTGTCTTGGCTGGTGATGCATTTATGGTGTGGAGTAGTGAAAGGATTCGAGCTTGTGAACACCGTGTGATTCTGAGATCAAACGTAACAAGGTACTCCTTGGGGTTACTTTCGTACAGTGCTGAGATTGTGCAGACATTAGAGGATTTAGTCGATGAGGAACATCCAATACGGTATAAGCCATTCGACCATTATTCCTATGTTGGTTTTCGTTTCACAGATGAAGCCGTAAAATGTACAAGTCGTATCAAAGCTTATTGTGGTATTTAA 939 0.4249 MMESVGENPLPVVDFSNENMKPGTDTWVAACEMVRRGFEDHGCFLAHFDKVAPNLINSVFCAMEQLFDLPLQTKRRKTSDKPNHGYTGQVPTSPLFESFAIHNPSNRKHCQNFSNIMWPTGNHHLCESVNEYAKLLQELDRTVKRVVFDSYGLDKVKCESFLESTDYSFRSYKYKIPAMDESNVGVNSHTDSTFITILHQRVDGLEVKLKDGEWSAIHASPLFCVLAGDAFMVWSSERIRACEHRVILRSNVTRYSLGLLSYSAEIVQTLEDLVDEEHPIRYKPFDHYSYVGFRFTDEAVKCTSRIKAYCGI 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02415 312 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 89 IPR026992 -
Vian3g02415 312 Pfam 2OG-Fe(II) oxygenase superfamily 179 257 IPR044861 -
Vian3g02415 312 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 290 - -
Vian3g02415 312 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 3 299 - -
Vian3g02415 312 Gene3D - 8 310 IPR027443 -
Vian3g02415 312 SUPERFAMILY Clavaminate synthase-like 5 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02415 Vian-Chr3 37484103 37485203 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02415 - - pvu:PHAVU_007G248500g 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01871 2 37609867 37611718 Vian3g02415 3 37484103 37485203 PCT