Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01474 ATGTCTCGAAAACTCGACAGCCCTGTGCAGACTCAGATGGCCGTGGCAGTGATAAGGAGCAGTCCCCTTGGGAGAGAGTATCATGGGAAGCAACCCGCAGGGCGAAGGCGCGTGTTTGTGCAAACAGAGAAAGGGTGTGTGTTGGGTATGGAGTTGGATCGGGGTGACAATGCACACACTGTTAAAAGGAGGTTGCAGCTTGCTTTGAATGTCCCCATTGAAGAGAGTAATTATCTGACTTTTGGGGATATTGTGTTGAAGAATGATCTCAGTGCCGTTCGGAATGATTCTCCCCTTTTGCTCACTAGGGGGAATCACATCCATAGGAGCTCTTCCACGCCGTGTCTTTCTCCAAAGGGGAGGGACATCCGGCAGAGGGATAAGAGTGGTCCTATTGAGATATTGGGACAGTCTAATCGCCTTGATAGGATCAAGCACATGATCAAGGACATTATGAAGGCGATTAAGATGGGGATTGATCCGATTCCAGTGCAAAGTGGGCTTGGCGGTGCATACTATTTCAGGAACAGTAAGGGGGATAGTGTTGCAATCGTGAAACCCACTGATGAGGAGCCTTTTGCTCCAAATAACCCAAAAGGTTTTGTTGGGAAGGCACTTGGGCAGCCTGGGCTGAAGCGGTCGGTTCGGGTTGGGGAAACTGGGTTTAGGGAGGTTGCAGCATATCTTCTTGACTATGATCATTTTGCCAATGTGCCGCCGACTGCACTGGTGAAGATTACGCACTCGGTGTTCAATGTGAATGATGGTGTGAATGGGAACAATTTTTGGAGGAAGAGGCTGGTTAGCAAGATTGCGTCTTTCCAGCAGTTCATTCCTCATGATTTTGACGCCAGTGATCATGGGACATCGAGCTTCCCGGTTGCTTCTGTGCATCGTATAGGGATTTTGGACATTAGGATTCTTAACACGGATAGGCATGCTGGGAACCTGTTGGTTAGAAAGCTTGATGGCATTGGGAGTTTGGGTCAGATGGAGCTGATTCCCATTGATCATGGCCTCTGCCTTCCTGAAACTTTGGAGGATCCATATTTTGAGTGGATTCATTGGCCACAGGCTTCAATTCCGTTTACGGAGGATGAACTTGCCTACATTGAAGATCTTGACCCTTATCGTGATTGTGACATGCTGAGAATGGAGCTTCCTATGATCCGAGAGGCGTGTCTCAGAGTGTTGGTGCTGTGTACCATTTTCCTCAAGGAGGCTGCGGCTTATGGTCTTTGTCTTGCTGAAATTGGTGAGATGATGACTAGGGAGTTCCGCAGGGGAGAGGAGGAGCCCAGTGAACTCGAGGTTGTTTGTTTGGAGGCGAGGAAGATAGTGGCGGAGAGGGAGGAACCGTCTCCCAGGCCCTCTCCCAGGGCTGAGATGAAATATGATGAGTTTCAGTTTGATATAGATTATGAAGAAGTTGGACTAGATTTTACACCAAAGATGGCAATGGATGACCCTTTAACCAGAGCAACTTTTCAGCCTGCAGTTGGGAACGGGTATGGTCGCAACCCGCTTTCCAAATTGGATGAATGCATCGAGGAGGAGGTAGAAGGTGAGGGAGAATCTCCTCAGGAATTTGTTACCTATTCTGCCGAAGAAAAAATCCCAACTGTTTCAGAACTTTCTGCGACACTGAAAAATACTATTTTAGATGGGAAAAACCAGAATCAACAGAAATATTCTGGAGGAAAGGTGGATAGTGGCCGTTTTTCAAATTCATCGTCTGGTCATAAGAGTGCCAACGAGCAGCTTCCTGCAAGCATAAGCTTTGTGGATGTAGCAGATATGGCTGAGGATGAATGGACATTGTTTCTGGAGAAGTTTCAGGAGCTGCTGTATCCCGCATTTGCTAAGAGGAAATCGATAACCTTTGGTCAGAGGCAGAGACAGAGGCTTGGTACTTCGTGCCAGTTTTGA 1929 0.4774 MSRKLDSPVQTQMAVAVIRSSPLGREYHGKQPAGRRRVFVQTEKGCVLGMELDRGDNAHTVKRRLQLALNVPIEESNYLTFGDIVLKNDLSAVRNDSPLLLTRGNHIHRSSSTPCLSPKGRDIRQRDKSGPIEILGQSNRLDRIKHMIKDIMKAIKMGIDPIPVQSGLGGAYYFRNSKGDSVAIVKPTDEEPFAPNNPKGFVGKALGQPGLKRSVRVGETGFREVAAYLLDYDHFANVPPTALVKITHSVFNVNDGVNGNNFWRKRLVSKIASFQQFIPHDFDASDHGTSSFPVASVHRIGILDIRILNTDRHAGNLLVRKLDGIGSLGQMELIPIDHGLCLPETLEDPYFEWIHWPQASIPFTEDELAYIEDLDPYRDCDMLRMELPMIREACLRVLVLCTIFLKEAAAYGLCLAEIGEMMTREFRRGEEEPSELEVVCLEARKIVAEREEPSPRPSPRAEMKYDEFQFDIDYEEVGLDFTPKMAMDDPLTRATFQPAVGNGYGRNPLSKLDECIEEEVEGEGESPQEFVTYSAEEKIPTVSELSATLKNTILDGKNQNQQKYSGGKVDSGRFSNSSSGHKSANEQLPASISFVDVADMAEDEWTLFLEKFQELLYPAFAKRKSITFGQRQRQRLGTSCQF 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01474 642 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 10 638 IPR044571 -
Vian10g01474 642 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 158 455 IPR000403 -
Vian10g01474 642 MobiDBLite consensus disorder prediction 553 585 - -
Vian10g01474 642 Pfam Phosphatidylinositol 3- and 4-kinase 168 418 IPR000403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01474 Vian-Chr10 25031497 25033425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01474 1 642 Acyl Lipid Metabolism Gene Families AT1G26270 68.817 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01474 - - gmx:100816579 1111.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01474 10 25031497 25033425 Vian10g01474 10 25031497 25033425 ECH
Vian10g01474 10 25031497 25033425 Vian9g00533 9 5920528 5923125 ECH
Vian10g01474 10 25031497 25033425 Vian1g03915 1 62245387 62247577 PCT