Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01174 ATGGGTGCTAATTTTTCATCATGTGTAAGTGATGATGGGGATTCTGATTCTATGAGGCCAAGGCTTGGGGATATACCTGAGAGTTGTGTGGCATTGATGTTGATGTATTTGGATCCACCAGATATATGTAAGTTAGCAGGATTGAATAGAGCATTTCGTGATGCTTCTTTTGCTGATTTTGTTTGGGAATCGAAATTGCCTTTGAATTATAAGTTCATAATGGAAAAAGCTTTGGATGATGATAGTGGTAGTTCTGTTGCTGAATTGGGAAAGAGGGATATTTATGCTAGACTTTGCAAGCATAACTTGTTTGACAATGGAACCAAGGAAATTTGGCTGGATAAGAGGACTGGTGGGGTTTGTATGGCAATTTCTTCCAAAGCGTTAAGGATTACAGGGATAGATGATCGCAGATATTGGAACCACATTTCAACAGAAGAATCAAGGTTCCATACAGTTGCTTATCTTCATCAAATTTGGTGGCTTGAAGTGGAAGGAGATATAGATTTCCAATTTCCACAAGGAACATACAGTGTCTTTTTCAGACTTCACCTTGGCAGGTCATCCAAGAAGCTCGGTCGTCGAGTTTGTAAGACCGAGCACATCCATGGATGGGATATAAAACCTGCAAAGTTTCAGCTTACAACTTCTGATGGTCAACGCGCCGTATCACACACTCATTTGGATAGTCCAGGACATTGGATCCTCTACCATGTAGGAAACTTTGTTTCTAAGAATTCGAATGATTTGATGAAGATAAAGTTCTCATTGACTCAAATAGATTGTACTCATACCAAAGGTGGTTTGTGTGTAGACTCTCTGCTTATATGCAACAGTAGTGATGTAAAAAAGGAAatgtaa 861 0.3914 MGANFSSCVSDDGDSDSMRPRLGDIPESCVALMLMYLDPPDICKLAGLNRAFRDASFADFVWESKLPLNYKFIMEKALDDDSGSSVAELGKRDIYARLCKHNLFDNGTKEIWLDKRTGGVCMAISSKALRITGIDDRRYWNHISTEESRFHTVAYLHQIWWLEVEGDIDFQFPQGTYSVFFRLHLGRSSKKLGRRVCKTEHIHGWDIKPAKFQLTTSDGQRAVSHTHLDSPGHWILYHVGNFVSKNSNDLMKIKFSLTQIDCTHTKGGLCVDSLLICNSSDVKKEM 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01174 286 Pfam Phloem protein 2 120 276 IPR025886 -
Tsu08g01174 286 PANTHER F-BOX PROTEIN PP2-A13 1 283 - -
Tsu08g01174 286 MobiDBLite consensus disorder prediction 1 20 - -
Tsu08g01174 286 SUPERFAMILY F-box domain 13 79 IPR036047 GO:0005515
Tsu08g01174 286 PANTHER F-BOX PROTEIN PP2-A15 1 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01174 Tsu-Chr8 12975418 12978306 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01174 - - gmx:100789493 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01174 08 12975418 12978306 Tsu08g01174 08 12975418 12978306 ECH
Tsu05g00303 05 2266553 2269987 Tsu08g01174 08 12975418 12978306 ECH
Tsu04g02481 04 28012277 28014226 Tsu08g01174 08 12975418 12978306 ECH