Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00303 atggGTCTTCGATTCTCTTCCTTTTTATCAAACTCAACCGTTTCTTCCGGTTCCACTCTCGGTGAGTTACCGGAAAGTTGCGTCGCTTCCATTATCGCTTACATGGATCCTCCTCAGATCTGTCAACTTGCTACCTTGAATCGCGCTTTTCGTGCTGCTTCTTCTGCTGATTTTGTTTGGGAATCTAAATTACCACCTAATTATCATCTTCTTCTCGCTAAAATTTTTCAAGATTTGCCAATTAATTTGGGTAAACGTGATATTTATACATCGCTTTGTCGTCTTAATTCTCTTGATGGAGGCACCAAGAAAGTTTGGATTGATAAAGGCACGGGTAAGCTTTGCTTGGCTATATCATCCAGCAAGGGACTATCAATAACCGGGGTTGATGATAGGAGATATTGGAATTATATCATCACTGAAGAATCTCGGTTCAATACTGTTGCATACCTTCAGCATACCTGGTGGTTTGAAGTGGACGGGGAAGTTGACTTCCCATTTCCAGCTGGGACATATAGCTTATTCTTCAGAATACATCTAGGGCGTGCCTACAAGAGGTTTGGCCGTCGGGTCTGCAATACTGAACATGTTCATGGGTGGGACAAAAAGCCCGTGCAATTCCAACTTTGGACTTCAGATGGGCAATACGTTGCCTCCCAGTGTTTTCTGAAAGAACCTGGCAATTGGACGTTTTACCATGCAGGTGATTTCACGGTTGAGAATGGAAATTCATCAACCAAAGTCAAATTCTCTATGACTCAAATTGATTGCACACACACTAAAGGTGGTCTGTGTTTGGATTCTGCTTTTATTTATCCAAGTGAATTCAAAAAGAGCAAGGCGTTTTTGAACTGCTCCTAA 861 0.4181 MGLRFSSFLSNSTVSSGSTLGELPESCVASIIAYMDPPQICQLATLNRAFRAASSADFVWESKLPPNYHLLLAKIFQDLPINLGKRDIYTSLCRLNSLDGGTKKVWIDKGTGKLCLAISSSKGLSITGVDDRRYWNYIITEESRFNTVAYLQHTWWFEVDGEVDFPFPAGTYSLFFRIHLGRAYKRFGRRVCNTEHVHGWDKKPVQFQLWTSDGQYVASQCFLKEPGNWTFYHAGDFTVENGNSSTKVKFSMTQIDCTHTKGGLCLDSAFIYPSEFKKSKAFLNCS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00303 286 ProSiteProfiles F-box domain profile. 17 63 IPR001810 GO:0005515
Tsu05g00303 286 SUPERFAMILY F-box domain 14 89 IPR036047 GO:0005515
Tsu05g00303 286 PANTHER F-BOX PROTEIN PP2-A12 1 281 - -
Tsu05g00303 286 MobiDBLite consensus disorder prediction 1 20 - -
Tsu05g00303 286 Pfam Phloem protein 2 115 273 IPR025886 -
Tsu05g00303 286 PANTHER F-BOX PROTEIN PP2-A15 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00303 Tsu-Chr5 2266553 2269987 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00303 - - gmx:100788842 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00303 05 2266553 2269987 Tsu05g00303 05 2266553 2269987 ECH
Tsu01g04466 01 52340184 52343381 Tsu05g00303 05 2266553 2269987 ECH
Tsu05g00303 05 2266553 2269987 Tsu08g01174 08 12975418 12978306 ECH