Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02481 ATGGGTATCCGATTCTCAGTTTCATCACAACCGTCCAAACCAAGTTTAGGAGAATTACCCGAAAGCTGCATAGCTGTTATAATGGAATACATGGATCCTCCTCAGATTTGTAAATTAGCTTCTTTGAACCGCGCTTTTCGCGCTGCTTCTTCCTCTGATTTTATTTGGGAATCCAAACTACCACCTAATTATCACGTCATCATCCGTAAAATATTTGACACTTCTTTTCCTTCTCATTTGGAGAAAAGAGGAATTTATTCCCGCCTTTGTTCCCTCAATACCTTCGATGGAGGCACAAAGAAAGTTTGGTTGGATAGAAGCATGGGTAAGCTATGTTTGTCTATTTCGGCTAAAGGATTGTCAATAACATATATGGATGATAGAAGATATTGGAACCATATCCCTACTGAAGAATCCAGATTCAGTAGTGTTGCATATCTCCAGCAAATCTGGTGGTTTGAAGTGGATGGTGAAGTCGAGTTTCCATTTCCAGCTGGAACATATAGCTTATTCTTCAGAATACATCTTGGAAAAGCCTCCAAAAGATTTGGAAGAAGGATTTGCAACACAGAACATGTTCATGGGTGGGATATAAAGCCGGTTAGATTCCAATTATGGACTTCAGACGGACAGTATGTTGCATCACAGTGTTTTCTGAAAGGTCCGGGCAAATGGCGCTATTACCATGCCGGCGATTTTGTAGTTGAAGATGGTAATGTatcaacaaaagttaaattCTCTATGACTCAAATTGATTGCACACATACTAAAGGTGGTCTTTGTTTAGATTCTGTTTTTGTGTATCCTAGTGAATTTAGAAAGGTTAAAGAATTTTTGAATTACTCTTGA 849 0.3828 MGIRFSVSSQPSKPSLGELPESCIAVIMEYMDPPQICKLASLNRAFRAASSSDFIWESKLPPNYHVIIRKIFDTSFPSHLEKRGIYSRLCSLNTFDGGTKKVWLDRSMGKLCLSISAKGLSITYMDDRRYWNHIPTEESRFSSVAYLQQIWWFEVDGEVEFPFPAGTYSLFFRIHLGKASKRFGRRICNTEHVHGWDIKPVRFQLWTSDGQYVASQCFLKGPGKWRYYHAGDFVVEDGNVSTKVKFSMTQIDCTHTKGGLCLDSVFVYPSEFRKVKEFLNYS 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02481 282 ProSiteProfiles F-box domain profile. 13 59 IPR001810 GO:0005515
Tsu04g02481 282 PANTHER F-BOX PROTEIN PP2-A15 8 277 - -
Tsu04g02481 282 SUPERFAMILY F-box domain 7 76 IPR036047 GO:0005515
Tsu04g02481 282 SMART fbox_2 19 59 IPR001810 GO:0005515
Tsu04g02481 282 Pfam Phloem protein 2 111 269 IPR025886 -
Tsu04g02481 282 PANTHER F-BOX PROTEIN PP2-A12 8 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02481 Tsu-Chr4 28012277 28014226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02481 - - gmx:100788842 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02481 04 28012277 28014226 Tsu04g02481 04 28012277 28014226 ECH
Tsu04g02481 04 28012277 28014226 Tsu08g01174 08 12975418 12978306 ECH