Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03993 ATGAGTGAACAACAAAGTAACAGCAACAACCAATTGGTAGTTCAGAATTCAGGAAGTTTAAGCTTCAGTAGTCATTTGTCTAAGGAAGATGAAGATTTGTCAAAGTCTGCTCTTTCAAATTTTAGggccaaagaagaagaaattgaaaagaaGAAGATGGAAGTTAGAGAAAAGGTTCAGTTTCAGTTAGGTCGTGTTGAAGAAGAAACCAAACGTCTTGCTACCATTCGtgagGAATTTCAGGAGCTTGAAGCACTTGCAGATCCAATGAGGAAAGAAGTTGCAGTTGTTAGAAAGAGAATTGATTCAGTAAACAAAGAATTAAAGCCACTTGGTCATACCTGCCAGAAGAAGGTGAGGctaattcaaatttcaaatttatag 384 0.3281 MSEQQSNSNNQLVVQNSGSLSFSSHLSKEDEDLSKSALSNFRAKEEEIEKKKMEVREKVQFQLGRVEEETKRLATIREEFQELEALADPMRKEVAVVRKRIDSVNKELKPLGHTCQKKVRLIQISNL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03993 127 Coils Coil 66 86 - -
Tsu07g03993 127 Coils Coil 38 58 - -
Tsu07g03993 127 Pfam Transcriptional activator 15 120 IPR007033 -
Tsu07g03993 127 PANTHER RAB6-INTERACTING PROTEIN GORAB 10 120 IPR007033 -
Tsu07g03993 127 PANTHER EXPRESSED PROTEIN 10 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03993 Tsu-Chr7 45989455 45992572 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03993 - - gmx:100527015 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03993 07 45989455 45992572 Tsu01g04034 01 48144457 48145572 ECH
Tsu07g03993 07 45989455 45992572 Tsu07g03993 07 45989455 45992572 ECH
Tsu07g03993 07 45989455 45992572 Tsu02g04684 02 55891330 55893693 ECH