Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04684 ATGGCAACACCAAAAAGATCATATGATCAACAAGTGAAGAATTCAGGAATGATTAACAATATGCAAAGTCCAAGAAGAGATGAAAGGGAAGAGGAAATGTCAAGATCAGTTCTAGCAATGTTCAAatcaaaggaagaagaaattgagAGGAGAAAATTAGAGGTTAGAGATAAGGTTCATGCTCATCTCGGTCGAGTCGAAAAAGAAACACAGCGATTGGCTGAGATAAGACAAGAGATTGAGGGATTCACAGATCCAATGAGGAAGGATGTTGCAATGGTTAGAAAGAAGATAGACATGGTTAACAAAGAGTTGAAGCCATTGGGTCTAACATGCCAGAAAAAGGAGAGAGAATACAATGAAGCACTTGAGGCTTTcaatgagaaaaacaaagaaaaggctcaacttgttacaaaattagTGGAgCTTGTGACTGAAAGTGAGAGAATAAGGATGAAGAAGCTGGAGGATCTAAGCAAAAATATAGATACACTTCACTAA 501 0.3333 MATPKRSYDQQVKNSGMINNMQSPRRDEREEEMSRSVLAMFKSKEEEIERRKLEVRDKVHAHLGRVEKETQRLAEIRQEIEGFTDPMRKDVAMVRKKIDMVNKELKPLGLTCQKKEREYNEALEAFNEKNKEKAQLVTKLVELVTESERIRMKKLEDLSKNIDTLH 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04684 166 Coils Coil 155 166 - -
Tsu02g04684 166 Coils Coil 112 132 - -
Tsu02g04684 166 PANTHER RAB6-INTERACTING PROTEIN GORAB 11 165 IPR007033 -
Tsu02g04684 166 PANTHER - 11 165 - -
Tsu02g04684 166 MobiDBLite consensus disorder prediction 1 22 - -
Tsu02g04684 166 MobiDBLite consensus disorder prediction 1 33 - -
Tsu02g04684 166 Pfam Transcriptional activator 13 164 IPR007033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04684 Tsu-Chr2 55891330 55893693 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04684 - - gmx:100796368 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04684 02 55891330 55893693 Tsu02g04684 02 55891330 55893693 ECH
Tsu07g03993 07 45989455 45992572 Tsu02g04684 02 55891330 55893693 ECH