Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04034 ATGTGTTTAATTTGTAGAAAGAGAGGCAAAATGCAGAAAATGAAGAACCTTGGAAGTATTGGAAGCAGTGGGAGATTTTCAACAGATGAGTGTGAAGATGAGGATGTTTCGAAGTTGGCTATTTCGACATTTCAAGCTAAGGAAGAAGAGATTGAGAGGAGAAAGATGGAGGTGAAAGAGAGAGTTGAACTTCAACTTGGACGCGCTGAAGAAGAGACGAGGCGCTTGGCTCACATTTGGGAAGAGCTTGAAGTTATGGAAGATCCTATGAGAAAGGAAGTTGCAATGGTGCGTAAGAAGATTGACTTGGCTAACAAAGACTTAAAGCAACTCGGACAGAACTACCAGAAAAAGGAGAAAGAGTATAAAGAAGCCTTGGATGCTTTCAATGAAAAGAACAAAGAGAAGAATCATTTGGTAGCGACGCTAACTGAGATGCTGACAGAGAGTGAAAGAATGAGGATCAAGAAACTGGAGGAGCTATGCAAGACGATAGAGTCTGTGTCACTAAAACAATAA 519 0.4085 MCLICRKRGKMQKMKNLGSIGSSGRFSTDECEDEDVSKLAISTFQAKEEEIERRKMEVKERVELQLGRAEEETRRLAHIWEELEVMEDPMRKEVAMVRKKIDLANKDLKQLGQNYQKKEKEYKEALDAFNEKNKEKNHLVATLTEMLTESERMRIKKLEELCKTIESVSLKQ 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04034 172 PANTHER RAB6-INTERACTING GOLGIN (DUF662) 11 168 - -
Tsu01g04034 172 Coils Coil 94 135 - -
Tsu01g04034 172 PANTHER RAB6-INTERACTING PROTEIN GORAB 11 168 IPR007033 -
Tsu01g04034 172 Coils Coil 41 61 - -
Tsu01g04034 172 Pfam Transcriptional activator 15 167 IPR007033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04034 Tsu-Chr1 48144457 48145572 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04034 - - gmx:100794044 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03993 07 45989455 45992572 Tsu01g04034 01 48144457 48145572 ECH
Tsu01g04034 01 48144457 48145572 Tsu01g04034 01 48144457 48145572 ECH