Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00288 ATGGAAGTCGGATTAGAGGAAGAACGAAACACAGTTCCTCATTCAAATGGCCAAGAAGAGAAAATATATGTTGCGATTCGAGTAAGGCCTTtgaatgaaagagaaaaatcgAGGCACGATGTGTCAGAATGGGAATGCATTTCTAATAATGCTATCAGATTCAAGAACAATGGCCACGCAGAACAACGATCACCGGCGGATACATACACATTTGATAGGGTATTTGGGGAAAAGTGTCCTACGAAGCAGGTTTATGAACAAGGGATTAAGGAAGTTGCTCTTTCAGTAGTTAGGGGTATCAATTGTAGCATTTTCGCGTACGGTCAAACAAGTAGTGGAAAGACATATACTATGACTGGGATTACTGAACTTGCAGTGAAGGATATATATGAATACATAGAGAAGCATAAAGAAagagaatttattttgaaattctcTGCCTTGGAAATATATAATGAAGCGGTGACAGACCTTCTCAATTCAAATGCTACTAGTCTAAGACTCCTAGATGATCCAGAGAAAGGGACTATTGTTGAGAAACTTACTGAGGAGACTCTGGCAGAGAGAAGTCGGTTGCAGCAACTTATTTCAAAATGTGCAGCTGAAAGGACAACGAAAGAGACTGCCATGAATGAAACAAGCTCCAGATCTCATCAAATTCTTCGACTGACAGTTGAAAGCAACCCCAGTGATTTTATAGGCACCGCAAGATCTGGGGCTGTTTTTGCCAGTGTGAATTTTGTTGATCTAGCAGGAAGCGAACGTGCTTCTCAAGCATTATCAGCAGGAACAAGATTGAGAGAAGGTAGCCACATAAACCGCAGTTTACTGACCCTCGGAACTGTAATCAGGAAACTAAGCAAGGAAAGAAACGGGCACATTCCTTACAGAGACTCGAAGCTTACTCGCATTCTGCAGAACTCTTTAGGAGGCAATGCCAGAACAGCCGTCATTTGTACAATTAGTCCTGCACGCAGCCAGGTTGAGCAATCAAAAAATACTCTATTTTTTGCTGGTTGCGCAAAACAGGTGACTACTAATGCTCGGGTCAACGTCGTGATGTCAGACAAGGTTTTGGTAAAGCAACTACAAAAGGAATTGGCTAGAATGGAGAACGAGTTGAAGAGCTTAAATACCACCATACTTAAGGAAAGGGAACTTCAGATTGAACAGATGGATAAGGAGATCAAAGAACTGACTAGGCAACGCAATCTCTTTCAGAACTTGCTCCAGTCAGTTGGGAAAGATCAGGCTATAAGAGTAGATCAAGATAGGGCATTACAATGGTTGAGTGTTGCTAATGATCGTAGTCCAGTTACAGACATTGTTTGTGAGAATCTTGAAAGAACAACATCCAGTTCATCTACTTCTAGTGAGCACCTTTTCAAGCAATCTGTGAATTCTGAAGACAGCTTTCTCTTGGATGGTTGTCCTCCTACATTTGTTGGGCCTGATCCATGTCAAGGTTGGGAGGAGATGGGTAAAAGATCTGAATCTGAAAATAACTGCAATGAAGTACCGAGTGTTGAAATTAAAGAAGTGGAAACAGAGCACAAAACAGATAATAATATGTCCGTTCCTGTTTTTGAAGAAAGTGAAGGAAATTCACCCATGATTCAATTTGTGGAAGTAGATGATAAATCATCCTCAGGGAATGGGCATAGTGATGACGATGCTCCTCAGCATAAAACCGAAGACATTAAAGGGATCAGCAACCATCTTGTAGACCTCTCCGAGAAATCTAATGACTCATTTGAGTCCGAAACTTGTTCCTTGGCTGCCATGTCTCCTCCTCAGGTAAATAAGATGGATCAGGAAAAGTCACCACATCCTCAGTTGGGTAAGTTGGAGCAAAATAATGTGTCACCTCCTTCGTTTACTAACCTAGACCAGGAACCCACGTTACCTGATCAGTCTGATCAGGAAGAGCTTAAAACTATGTCACCTCCTCAACTTGATGATCTGGAACAAGTATCCTTCAAATCACCAGCTAGTGTCGAAAAGGAACACTCTACTAGTTTGGTATACTTTCCTGAGAAGCTATCTGAACAGAAGTTACGTGCCAAAAGAAGAAAATCTTCTAGAAAATCTTCTCTAGTTCACGAGATGAATGCTTCGATGGAAGATGTGGAATCTGTTATGGATTCTAATACGGAGGAAACTTCCAGCGACCTTAATTTTGTTGTAAGAATGAACCAAAGGGCTAAGTCAAAATCAGCGGACAAAGACATTGATGATTATCGTATGGTACCTGTTAGGACGCTTCACaccaataaaaatatgaacagAGAAAAAGGTCTCAGTTTCCCCGGAGCTTGGGGGGCTTTAATACCCACTAAATTTGAGATGCAACAGAGAGATATAGTCGAACTTTGGGACGCATGCCATGTGCCACTGGTACATAGATCctattttttccttctaatcAAAGGTGAACTATCGGATTCTGTGTACTTGGATGTAGAGCTCAGACGATTGTCCTTTTTAAAGGACACTTTTTCTAGCGGAAATTACATTACAGGAGATGGTCTTGACGTCACACCTAATTCAAgCCACATGTCTCTGACTCATGAGAGGAAAATGCTCAGTAAGCAAGTTTATAAGAAGTTTTCGAGGAGGGGAAGAGAGGAATTATACCTGAGGTGGGGTATTGATTTGAAGACTAAGCACAGAAGTATGCAATTGGCATGGCTCGTATGGTCGGATACAAGAGATTTGAACCACATTAGAGAAAGTGCTGCACTTGTTGGGAAGCTTGTTGGTTTTATAAACACGGGTGAAGCCTCAAAGAAAACTTTTGGACTTGGCTTCTTAACCCGACTTACGAGCAGGGGATCCCCTAAGTGGAATGACACAATGTCTACTCTTTAA 2871 0.4061 MEVGLEEERNTVPHSNGQEEKIYVAIRVRPLNEREKSRHDVSEWECISNNAIRFKNNGHAEQRSPADTYTFDRVFGEKCPTKQVYEQGIKEVALSVVRGINCSIFAYGQTSSGKTYTMTGITELAVKDIYEYIEKHKEREFILKFSALEIYNEAVTDLLNSNATSLRLLDDPEKGTIVEKLTEETLAERSRLQQLISKCAAERTTKETAMNETSSRSHQILRLTVESNPSDFIGTARSGAVFASVNFVDLAGSERASQALSAGTRLREGSHINRSLLTLGTVIRKLSKERNGHIPYRDSKLTRILQNSLGGNARTAVICTISPARSQVEQSKNTLFFAGCAKQVTTNARVNVVMSDKVLVKQLQKELARMENELKSLNTTILKERELQIEQMDKEIKELTRQRNLFQNLLQSVGKDQAIRVDQDRALQWLSVANDRSPVTDIVCENLERTTSSSSTSSEHLFKQSVNSEDSFLLDGCPPTFVGPDPCQGWEEMGKRSESENNCNEVPSVEIKEVETEHKTDNNMSVPVFEESEGNSPMIQFVEVDDKSSSGNGHSDDDAPQHKTEDIKGISNHLVDLSEKSNDSFESETCSLAAMSPPQVNKMDQEKSPHPQLGKLEQNNVSPPSFTNLDQEPTLPDQSDQEELKTMSPPQLDDLEQVSFKSPASVEKEHSTSLVYFPEKLSEQKLRAKRRKSSRKSSLVHEMNASMEDVESVMDSNTEETSSDLNFVVRMNQRAKSKSADKDIDDYRMVPVRTLHTNKNMNREKGLSFPGAWGALIPTKFEMQQRDIVELWDACHVPLVHRSYFFLLIKGELSDSVYLDVELRRLSFLKDTFSSGNYITGDGLDVTPNSSHMSLTHERKMLSKQVYKKFSRRGREELYLRWGIDLKTKHRSMQLAWLVWSDTRDLNHIRESAALVGKLVGFINTGEASKKTFGLGFLTRLTSRGSPKWNDTMSTL 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00288 956 MobiDBLite consensus disorder prediction 549 564 - -
Tsu07g00288 956 Coils Coil 353 409 - -
Tsu07g00288 956 MobiDBLite consensus disorder prediction 684 718 - -
Tsu07g00288 956 PRINTS Kinesin heavy chain signature 208 225 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g00288 956 PRINTS Kinesin heavy chain signature 244 262 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g00288 956 PRINTS Kinesin heavy chain signature 294 315 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g00288 956 PRINTS Kinesin heavy chain signature 99 120 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g00288 956 PANTHER KINESIN-LIKE PROTEIN KIN-7J 15 955 - -
Tsu07g00288 956 ProSitePatterns Kinesin motor domain signature. 243 254 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu07g00288 956 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 379 IPR027417 -
Tsu07g00288 956 MobiDBLite consensus disorder prediction 599 656 - -
Tsu07g00288 956 CDD KISc_CENP_E 21 344 - -
Tsu07g00288 956 Pfam Kinesin motor domain 27 344 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g00288 956 MobiDBLite consensus disorder prediction 599 646 - -
Tsu07g00288 956 MobiDBLite consensus disorder prediction 545 564 - -
Tsu07g00288 956 ProSiteProfiles Kinesin motor domain profile. 21 344 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g00288 956 PANTHER CENTROMERE PROTEIN E 15 955 - -
Tsu07g00288 956 SMART kinesin_4 19 352 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g00288 956 Pfam Domain of unknown function (DUF3490) 780 939 IPR021881 -
Tsu07g00288 956 MobiDBLite consensus disorder prediction 515 536 - -
Tsu07g00288 956 Gene3D Kinesin motor domain 12 375 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00288 Tsu-Chr7 2190999 2198158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00288 19 381 Miscellaneous Gene Families AT5G06670 41.509 5.44e-81 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00288 K11498 - gmx:100802097 1149.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00288 07 2190999 2198158 Tsu05g00812 05 6931313 6936728 ECH
Tsu07g00288 07 2190999 2198158 Tsu04g03487 04 44059357 44067282 ECH
Tsu07g00288 07 2190999 2198158 Tsu07g00288 07 2190999 2198158 ECH