Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00812 atgggttCTGTTGGAGGAGAAGAGGCAATTGAAGAGGGTGTAAAAAATCATGAAGAAAGAATTCAAGTTTCGGTTCGAATTCGGCCTTTAAACGATAAGGAAATTGCGAGAAATGATGTATCTGATTGGGAATGTATCAATGATACTACaattatatatagaaataacaTTTCAGTTTCTGAAAGATCTCTATATCCTACTGCATATTCATTTGACAGAGTATTTAGATCAGATTGTGGAACAAGGGAGGTGTATGAAGAAGCAGCTAAAGAAGTTGCTCTTTCTGTTGTTGGTGGAATTAACTCAAGCATTTTTGCTTATGGACAAACAAGCAGTGGAAAAACATACACCATGAGTGGTATAACTCAATGCACTGTAGCTGATATTTTTAACTACATTGAGAAGCACATGGAGAGAGAATTCATGTTGAAGTTTTCAGCAATTGAGATTTATAATGAATCTGTCAGGGATCTGCTAAGTCCAGATTGTACTCCTCTTAGACTTCTTGATGATCCTGAGAGAGGGACTGTTGTTGAGAAACTTACCGAGGAAACTATAACAGATTGGAACCATTTTACTGAACTTATTTCTTTTTGTGAAACACAAAGGCAGATAGGAGAGACAACACTGAATGAAGCAAGCTCAAGATCTCATCAGATTCTTAGACTGACAGTTGAAAGTTCGGCACGCGAATTTCTTGGAAATGACAAGTGCAGCTCTCTTTCTGCTTCAGTGAATTTTGTTGATCTTGCTGGAAGTGAAAGGGCATCCCAAACCAATTCAGCTGGTGTCAGGTTGAAAGAAGGCTGCCACATAAATCGTAGTTTACTAACTCTAGGAACTGTTATCCGCAAACTCAGTAAGGGAAGAAATGGACACATTCCTTTCAGAGATTCAAAGCTAACGCGCATATTGCAATCCTCATTAGGAGGCAATGCTAGAACTGCAATCATCTGCACCATGAGCCCTGCACGGAGCCACGCTGAACAAACCAGAAACACACTCTTATTTGCAAGCTGTGCTAAAGAAGTTGAAACCAATGCACAAGTCAATGTAGTGGTGTCGGATAAAGCACTAGTCAAACAATTACAAAAGCAGTTGGCTAAACTGGAAAGTGAATTGAGATATTCAGGATCATCCCGTCCTAATAATTCTGATTCTTCAGAATTGTTGAGAGAGAAAGATCAAGAAATTGAGATGTTAAAGAAAGAGGTAAGGGAGCTGACATTGCAGCGTGATCTTGCGCAAGTTCAAATTAAGGACATGCTCCGAGAAGCTGGAGATAACGTGTCTTGTTTAATAGGAGTGGAGAGTTTAGCTCCCCGGTATCCCAAACTGCGCGTGAGAAATACATGGAACTTTGAAAATCAAAGACAGGAATCGGAACCGGAACCAGAACCAGAACCAAATGTAGTGAGTATTGATTGTGAAGAAAGTGTTAGGTCCTTTGATGCATCTCAATATTCAGATGGACATAGTATTAGTTCTGACGATAATTTGTTCCAACTCCCTGACCTTGAAAAGAATCTTATAGTTAGAAATTCTTCACCAAGGCAATCAGTTACAAGCATTAACAATGCTTTACAGAATGATATGGATCAGAAGAACATTGAAGATCAGAATGAAGAGGACTATTGTAAAGAAGTTAGGTGCATTGAGATAGAAGAGCCTATCACAAATACACATGCACATACAAACTCAGAAGATTTAAGATCAAATACATATACTGATTCTAGTGCATCATCTCCTCATCAAGCAAAGACAGATATGTCAGGATCGATTGTAGTCGATGCTGAGAACAAAAACGATACAGATTTGTGCTCGTCAGGGTTAAGGGAAGACAATAGACTGATCAATATGCGCGAATATTTTGCTCTTCCGACTCCAGAAAATGGTACTCCTTGGATGATAGAAAGTAATAGAAGTAGTTCTAGTTCTAGATCGTTGAGGTTGAGTCGAAGTAGAAGTTGTAAAGCCCGTCTCATGAGGAATTTATCTTCCGATTggtttgaagatgatgatgtgaTTCAGAACACACCTCCAATAGGGAATGAAAAGGACTTTGCTGGAAGACCTGAGGGATTTCTGAAGAAGGTTCATACACTACACTATAATGCAAATGCAGAGAGGAATTCTATGGAAAATTTTACTGCTGATGATGTACAGAATGTGAAATCATACATTGACAAGAAAAGTGAGAGCAATGGTCCTTTAACTCCAAAAACAAAGGAAACAGAAAATCTTAAGAGACTGAATTTACTTGATGACCATGAGGTTCCTGGGACAGAATTGGAGGTCATCTTGTCTGGAAAGAATGTCAAAGATATAGGTTTGGACCCAATGCAAGCTGATGGAGAAAGTGATTCAGAGTGGCCTTCAAAATTTAAGAGGCTGCAAAAGGAGATTGTTGAACTCTGGGATGCTTGTAATATTTCCTTGGTTCACAGAACTTACTTTTTCCTTCTCTTCAAAGGGGATCCATTAGATTCTATTTATATGGAGGTTGAGCACAGAAGGCTATCGTATCTTAAGCAAATGTTCTTACAAGGCAATAAGACTCTTGAAGATGGAAGAACTCTTACCCCTGAGACAAGCATGAGATATCTCAAAAGAGAGAGGCAAATGTTGTGCAATCAAATGGAGAGGAAGCTATCTAAATCTGAGAgagaaaatttatatttgaaatggGACATTCGTTTGAGTTCAAAGCATAGGAGGTTACAGTTATCTCATCATTTATGGACTGACACAAACAACATGGATCACATTAGAGAGAGTGCAGAAGTTGTTGTAAAATTGGTTGGTCCAGTAGAGCCAGAACAAGCTCTTAAGGAAATGTTTGGCCTCAACTTTGCTCCAAGGCCCACAAGTAGGAAATCTTTTAGTTGGTCTTTTACTAACAGTATGAGGTAG 2913 0.3817 MGSVGGEEAIEEGVKNHEERIQVSVRIRPLNDKEIARNDVSDWECINDTTIIYRNNISVSERSLYPTAYSFDRVFRSDCGTREVYEEAAKEVALSVVGGINSSIFAYGQTSSGKTYTMSGITQCTVADIFNYIEKHMEREFMLKFSAIEIYNESVRDLLSPDCTPLRLLDDPERGTVVEKLTEETITDWNHFTELISFCETQRQIGETTLNEASSRSHQILRLTVESSAREFLGNDKCSSLSASVNFVDLAGSERASQTNSAGVRLKEGCHINRSLLTLGTVIRKLSKGRNGHIPFRDSKLTRILQSSLGGNARTAIICTMSPARSHAEQTRNTLLFASCAKEVETNAQVNVVVSDKALVKQLQKQLAKLESELRYSGSSRPNNSDSSELLREKDQEIEMLKKEVRELTLQRDLAQVQIKDMLREAGDNVSCLIGVESLAPRYPKLRVRNTWNFENQRQESEPEPEPEPNVVSIDCEESVRSFDASQYSDGHSISSDDNLFQLPDLEKNLIVRNSSPRQSVTSINNALQNDMDQKNIEDQNEEDYCKEVRCIEIEEPITNTHAHTNSEDLRSNTYTDSSASSPHQAKTDMSGSIVVDAENKNDTDLCSSGLREDNRLINMREYFALPTPENGTPWMIESNRSSSSSRSLRLSRSRSCKARLMRNLSSDWFEDDDVIQNTPPIGNEKDFAGRPEGFLKKVHTLHYNANAERNSMENFTADDVQNVKSYIDKKSESNGPLTPKTKETENLKRLNLLDDHEVPGTELEVILSGKNVKDIGLDPMQADGESDSEWPSKFKRLQKEIVELWDACNISLVHRTYFFLLFKGDPLDSIYMEVEHRRLSYLKQMFLQGNKTLEDGRTLTPETSMRYLKRERQMLCNQMERKLSKSERENLYLKWDIRLSSKHRRLQLSHHLWTDTNNMDHIRESAEVVVKLVGPVEPEQALKEMFGLNFAPRPTSRKSFSWSFTNSMR 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00812 970 Pfam Domain of unknown function (DUF3490) 794 953 IPR021881 -
Tsu05g00812 970 SMART kinesin_4 18 352 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g00812 970 MobiDBLite consensus disorder prediction 560 589 - -
Tsu05g00812 970 Gene3D Kinesin motor domain 11 375 IPR036961 -
Tsu05g00812 970 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 12 969 - -
Tsu05g00812 970 Coils Coil 384 425 - -
Tsu05g00812 970 ProSitePatterns Kinesin motor domain signature. 243 254 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu05g00812 970 PANTHER CENTROMERE PROTEIN E 12 969 - -
Tsu05g00812 970 CDD KISc_CENP_E 21 344 - -
Tsu05g00812 970 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 377 IPR027417 -
Tsu05g00812 970 PRINTS Kinesin heavy chain signature 294 315 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g00812 970 PRINTS Kinesin heavy chain signature 208 225 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g00812 970 PRINTS Kinesin heavy chain signature 244 262 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g00812 970 PRINTS Kinesin heavy chain signature 99 120 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g00812 970 MobiDBLite consensus disorder prediction 373 392 - -
Tsu05g00812 970 Coils Coil 353 373 - -
Tsu05g00812 970 Pfam Kinesin motor domain 26 344 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g00812 970 ProSiteProfiles Kinesin motor domain profile. 20 344 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00812 Tsu-Chr5 6931313 6936728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00812 18 374 Miscellaneous Gene Families AT5G06670 44.110 6.20e-87 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00812 K11498 - gmx:100809766 1371.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00812 05 6931313 6936728 Tsu04g03487 04 44059357 44067282 ECH
Tsu07g00288 07 2190999 2198158 Tsu05g00812 05 6931313 6936728 ECH
Tsu05g00812 05 6931313 6936728 Tsu05g00812 05 6931313 6936728 ECH
Tsu02g02499 02 25667455 25674195 Tsu05g00812 05 6931313 6936728 ECH
Tsu05g00812 05 6931313 6936728 Tsu04g03487 04 44059357 44067282 PCT