Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03487 ATGTACTACTATTGGAGATGGGaTCGCATTTTCAAAGATAATGATTGGAGCTTGAAAGTTGCGGTGGCTCGTGTGATCGACACCGTAACAAATCCCGACAATAGAATAGTAAAAGGGGAGTTGGCAATGCCAGGCTCCACAGGGGAGGAGAGAATTCTTGTTTCTGTTCGTGTGCGACCGCTGAATGATAAGGAGTTAGCAAGAAATGATCTGTCTGAATGGGAATGCATTAATGACACTACCATTGTGTACAGAAGCAACCTTTCAGCTTCTGATAGGTCTCTGTATCCAACAAGCTATTCATTTGACAGAGTTTTTAGGACTGATTGCCCCACAAGGCAAGTGTACGAAGAAGCATCTAAGGAGGTAGCTCTTTCTGTTCTCAATGGAATCAACTCTAGCATTTTTGCATATGGACAAACAAGCAGCGGAAAGACATACACCATGAGTGGTATAACTGATTATGCTGTAGCTGACATTTTTGATTACATAGAAAAGCATAAAGAAAGGGAATATGTCTTGAAGTTTTCAGCAATGGAGATCTATAATGAATCTGTTAGGGACCTCCTTAGTAACGACATTACACCTCTCAGACTTCTTGATGATCCAGAGAAAGGCACAGTTGTTGAGAAACTCACCGAGGAAACTTTGGAAGACTGGGACCATTTTACagatcttctttctttctgtgaAACACAACGGCAGATAGGAGAGACATCCTTGAATGAAGTAAGCTCTAGATCACATCAAATTCTAAGACTGACAATTGAAAGTTCTGCACGTGAATTTCTGGGAAATTATAAATCGAGCTCTCTTGCCGCTTCTGTGAATTTTGTTGATCTTGCTGGAAGTGAGCGAGCATCACAAACTAATTCAGCTGGTACGAGGTTGAAAGAAGGATGCCACATAAACCGCAGTTTACTGACTCTGGGAACTGTCATTCGTAAACTCAGCAAGGGGGGGAAAAATGGACACATCCCTTTCAGAGATTCAAAGCTAACCCGCATATTGCAGTCCTCAATAGGAGGAAATGCTAGAACAGCAATCATCTGTACCATGAGTCCTGCACGGAGCTATGTTGAACAAACCAGAAACACCCTCTTATTTGCAAGTTGTGCTAAAGAAGTGTCCACTAATGCAAGAGTCAATGTAGTGATTTCTGATAAAATGTTGGTCAAACAATTGCAACGAGAGTTGGCTCGGCTGGAAGCTGAGATGAGAAGTTCAGTGTCAACCCGTCGTAAAACTGATTCTGCAGAATTGCTGAGGGAAAAAGACCTCCAAATTGAGATGTTAAAGAAAGAGATAATGGATCTGGCTTTGCAACGGGACCTTGCCCACTCTCAAATTAAGGACATGCTTCAAGTGGTGGGAGACGATATGTCCTCATGTGATTTGGATAGTTTGGGTCCTCAGTATCCCAAACTACGTGTGCGAAATTCTATGGACTTAGAAAGTCTAATAGACGaaccaaatttattaaattttgacaGCTTTGAGAGTCTTAGATCTTTTGATGCTGCTCAATATTCAGATGGACATAGTGTTAGTTCCGAAGATAACTATTTCCAGCTCCCTGATTTGGAAAAAAGTCTTCCCGTCAGGAATTCTTTTCAAGGGGTCTCAATTGTACGTCATGATGCTATAACGAATGATTCGGATCAAAAGATATTTCAAGAACAGCCCGATAATAAATTAGGCAACAGCTTTCAGAAAGTTAGGTGCCCTGTTTCAGAAGATCCAATTACAAACACAGATACACACTCAAATCCAGCAGGTTTGAGTACAACTAAAGAATCAGACTCAAATGCGTCATCTCCGAGGGCAAATACAGCTGTCTCAGGGTTGACAGAAGTTGATAACATAGACAAAGAAAATCAATACTTGTTCTCATCTCCAGGGGAGAATACAGCTGTCTCAGGATTGACAGAAGTTGATGACATAGACAAAGAAAATCAAGATATGTTCTCATCTCCGGGGGAAAGTACAGCTGTCTCAGGATTGACAGAAGTTGATaacattgacaaaaaaaatcaggaCTCGCGTTCATTAGGGTTAAAGGAAAACAAAGAATTGAATCTATTGCACCAAGGTTTTGTTCTTCCCTCTATAGAGAAAATAAAGCCATGTCTGGTAGAAAAAACGCCAACTAGTTCTAGAATCTTGAAATTGACAAGAAGCAGAAGCTGTAAAGCAAGTCTCATGAAGGATTCATCTTCAGATTGGTTTGACCAGGAAGAAATATTTCAGAACACCCCCCCAATAGGAATCCAAAAAGACCACATTGGAAGACCTGAGGGTTTTGAAAGGAAGACCTATACACTAAATTGTAATCCCAATGCTGAGAGGTTATCCTGGGCTGGTAATGGGAATTGTGTGAGATGTTGTGCTGTTGACATGCAGAACGTGAAATCATCGTTCGATATGGAGATTGATGATGATAGTGATTTATCTCCAGTAAGAAAGGAAAAGCAAGAACGTGGAAGTTCAAATCCACCGGTGAATCATGAGGTTTCTCCCAAAAAGTTCAAAAAcgttgggtcaaacacattaCAATCTGTTGAAGAAAAACATTTGGAATGGTCTTCAGAATTTAAGCGGCTGCAGAAAGAGATTATTGGACTCTGGTATTCATGTAATGTTTCATTGGTCCACAGGACTTACTTTTTCCTTTTATTCAAAGGGGAACCCTCAGATTCTATCTATATGGAGGTAGAGCGGAGAAGGTTGTCCTATCTCAAAGATAATCAAATTTTAGAAGATGGACGAACCCTTACCCCTGAATCAAGCAAGAGATATCTTCGAAAAGAGCGACAAATGTTGAGCAAGCAAATTCAGAAGAAGTTGTCAAAATCTGAAAGAGAGAACTTGTATTTGAAGTGGGGTATTAGTATGAGTTCAAAGCATAGGGGGTTGCAATTGACTCATCGCCTATGGTCCGAAACAGATATAAACCATGTCAGAGAGAGTGCTACCATTGTTGCAAAGCTGGTTGGTACAGTTGAGCCAGATCAAGCTTTCAAGGAGATGTTTGGCCTCAACTTTGCACCACGTCGCAGAAGAAAGAAATCTTTCGGTTGGACGACAAGTATGAAGCAGATTTTGTGA 3108 0.3986 MYYYWRWDRIFKDNDWSLKVAVARVIDTVTNPDNRIVKGELAMPGSTGEERILVSVRVRPLNDKELARNDLSEWECINDTTIVYRSNLSASDRSLYPTSYSFDRVFRTDCPTRQVYEEASKEVALSVLNGINSSIFAYGQTSSGKTYTMSGITDYAVADIFDYIEKHKEREYVLKFSAMEIYNESVRDLLSNDITPLRLLDDPEKGTVVEKLTEETLEDWDHFTDLLSFCETQRQIGETSLNEVSSRSHQILRLTIESSAREFLGNYKSSSLAASVNFVDLAGSERASQTNSAGTRLKEGCHINRSLLTLGTVIRKLSKGGKNGHIPFRDSKLTRILQSSIGGNARTAIICTMSPARSYVEQTRNTLLFASCAKEVSTNARVNVVISDKMLVKQLQRELARLEAEMRSSVSTRRKTDSAELLREKDLQIEMLKKEIMDLALQRDLAHSQIKDMLQVVGDDMSSCDLDSLGPQYPKLRVRNSMDLESLIDEPNLLNFDSFESLRSFDAAQYSDGHSVSSEDNYFQLPDLEKSLPVRNSFQGVSIVRHDAITNDSDQKIFQEQPDNKLGNSFQKVRCPVSEDPITNTDTHSNPAGLSTTKESDSNASSPRANTAVSGLTEVDNIDKENQYLFSSPGENTAVSGLTEVDDIDKENQDMFSSPGESTAVSGLTEVDNIDKKNQDSRSLGLKENKELNLLHQGFVLPSIEKIKPCLVEKTPTSSRILKLTRSRSCKASLMKDSSSDWFDQEEIFQNTPPIGIQKDHIGRPEGFERKTYTLNCNPNAERLSWAGNGNCVRCCAVDMQNVKSSFDMEIDDDSDLSPVRKEKQERGSSNPPVNHEVSPKKFKNVGSNTLQSVEEKHLEWSSEFKRLQKEIIGLWYSCNVSLVHRTYFFLLFKGEPSDSIYMEVERRRLSYLKDNQILEDGRTLTPESSKRYLRKERQMLSKQIQKKLSKSERENLYLKWGISMSSKHRGLQLTHRLWSETDINHVRESATIVAKLVGTVEPDQAFKEMFGLNFAPRRRRKKSFGWTTSMKQIL 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03487 1035 MobiDBLite consensus disorder prediction 810 847 - -
Tsu04g03487 1035 PANTHER CENTROMERE PROTEIN E 40 632 - -
Tsu04g03487 1035 PANTHER CENTROMERE PROTEIN E 660 1035 - -
Tsu04g03487 1035 ProSitePatterns Kinesin motor domain signature. 274 285 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu04g03487 1035 Coils Coil 422 442 - -
Tsu04g03487 1035 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 660 1035 - -
Tsu04g03487 1035 MobiDBLite consensus disorder prediction 579 609 - -
Tsu04g03487 1035 MobiDBLite consensus disorder prediction 810 830 - -
Tsu04g03487 1035 PRINTS Kinesin heavy chain signature 326 347 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g03487 1035 PRINTS Kinesin heavy chain signature 130 151 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g03487 1035 PRINTS Kinesin heavy chain signature 239 256 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g03487 1035 PRINTS Kinesin heavy chain signature 275 293 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g03487 1035 SMART kinesin_4 49 384 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g03487 1035 Coils Coil 851 871 - -
Tsu04g03487 1035 Coils Coil 385 412 - -
Tsu04g03487 1035 MobiDBLite consensus disorder prediction 831 847 - -
Tsu04g03487 1035 Pfam Kinesin motor domain 57 376 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g03487 1035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 407 IPR027417 -
Tsu04g03487 1035 ProSiteProfiles Kinesin motor domain profile. 51 376 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g03487 1035 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 40 632 - -
Tsu04g03487 1035 Gene3D Kinesin motor domain 45 407 IPR036961 -
Tsu04g03487 1035 CDD KISc_CENP_E 52 376 - -
Tsu04g03487 1035 Pfam Domain of unknown function (DUF3490) 864 1017 IPR021881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03487 Tsu-Chr4 44059357 44067282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03487 39 406 Miscellaneous Gene Families AT2G21380 41.867 1.13e-77 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03487 K11498 - gmx:100775190 1273.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00812 05 6931313 6936728 Tsu04g03487 04 44059357 44067282 ECH
Tsu07g00288 07 2190999 2198158 Tsu04g03487 04 44059357 44067282 ECH
Tsu04g03487 04 44059357 44067282 Tsu04g03487 04 44059357 44067282 ECH
Tsu02g02499 02 25667455 25674195 Tsu04g03487 04 44059357 44067282 ECH
Tsu05g00812 05 6931313 6936728 Tsu04g03487 04 44059357 44067282 PCT