Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00256 ATGGATCAACTAATTACAAAACTATTCTCAATTTTCCTTACACTTTATCTTTCAACAACAGGAGTAGCATCAACAACATTCACACTCCTTAACAAATGCAATTATACAGTGTGGCCAGGAATTCTCTCCAACGCCGGCGTTGCGCCACTTCCAACCACCGGCTTCGTTCTTCAATCCGGTGAATCCAAATCAATTACTCCACCTTCTTCCTGGGGAGGTCGTTTCTGGGGACGCACACTCTGTTCTCAAGACTCCACCGGAAAATTCTCTTGCCTAACCGGCGATTGTAACTCCGGCAAACTCGAATGCTCCGGAAACGGAGCAACACCGCCAGCTACTTTAGCAGAATTCACTCTCGATGGATCCGATGGACTCGATTTCTTCGACGTGAGTTTAGTTGACGGTTACAACGTCCCTATGCTTGTGGTTCCACAAGGTGGTTCCGGTGATAACTGTAAAAGTACCGGTTGTGTTGAGGATTTACTCGGCGCGTGTCCTTCAGAGCTTAAGGTTACGAGCGTGGATGGGAAAGAGAGTGTGGCGTGTAAAAGTGCTTGTGAAGCGTTTGGATCGGCGCAGTATTGTTGTAGCGGCGCGTATGGTTCACCTAACACTTGTAAACCTTCAAGTTATTCTGAGTTGTTTAAGAATGCTTGCCCACGCGCGTATAGCTACGCGTATGATGATAAGACAAGCACGTTTACTTGTGCTTCTGCCGCTGAATACATAATCACGTTTTGCCCTTCCACTAACAGCAACAACCCCAGTAAAAAATCGTGGGAGGGAGAAAATCCAAAATCAGATGGCAGTGACTCATCATCATCACCCCAGCTTAACAACGGTTCAATGGTGTACGTTGGTGCATTAGATCAGAGTGAAATATCATGGGCCACGTGTACTAATGTATGGAAATCCCAAACTATTCTTCTCACCATTACAACGGCTATGTGGCTATTGTGTCAGTTTTTCCATTTGTAA 978 0.4571 MDQLITKLFSIFLTLYLSTTGVASTTFTLLNKCNYTVWPGILSNAGVAPLPTTGFVLQSGESKSITPPSSWGGRFWGRTLCSQDSTGKFSCLTGDCNSGKLECSGNGATPPATLAEFTLDGSDGLDFFDVSLVDGYNVPMLVVPQGGSGDNCKSTGCVEDLLGACPSELKVTSVDGKESVACKSACEAFGSAQYCCSGAYGSPNTCKPSSYSELFKNACPRAYSYAYDDKTSTFTCASAAEYIITFCPSTNSNNPSKKSWEGENPKSDGSDSSSSPQLNNGSMVYVGALDQSEISWATCTNVWKSQTILLTITTAMWLLCQFFHL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00256 325 PANTHER OS03G0233200 PROTEIN 12 274 IPR001938 -
Tsu07g00256 325 MobiDBLite consensus disorder prediction 253 279 - -
Tsu07g00256 325 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Tsu07g00256 325 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Tsu07g00256 325 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Tsu07g00256 325 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Tsu07g00256 325 CDD TLP-PA 26 247 - -
Tsu07g00256 325 SUPERFAMILY Osmotin, thaumatin-like protein 25 249 IPR037176 -
Tsu07g00256 325 ProSiteProfiles Thaumatin family profile. 24 248 IPR001938 -
Tsu07g00256 325 Gene3D Thaumatin 25 248 IPR037176 -
Tsu07g00256 325 Pfam Thaumatin family 31 248 IPR001938 -
Tsu07g00256 325 PANTHER BNAA02G17480D PROTEIN 12 274 - -
Tsu07g00256 325 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Tsu07g00256 325 SMART tha2 27 248 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00256 Tsu-Chr7 1978519 1980727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00256 11 267 Receptor kinase-like Gene Family AT5G38280 53.257 5.72e-93 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00256 - - gmx:100780102 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00256 07 1978519 1980727 Tsu05g00851 05 7389492 7391150 ECH
Tsu07g00256 07 1978519 1980727 Tsu04g03521 04 44369339 44370680 ECH
Tsu07g00256 07 1978519 1980727 Tsu07g00256 07 1978519 1980727 ECH