Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00851 ATGGCTTCTTCAACTCAATTTGCTCTCACTTTGATTGCCCTAACTCTGTTCCAATTCCTAACAGGTTCTTATTCAACAACATTCACAATTGTTAACAAGTGCAGTTACACAGTTTGGCCGGGAATTTTATCCGGTGCCGGAACACCACAGTTCTCCACCACCGGTTTTGCTCTACAACCCGGCGAATCAAATGCCCTCGCCGCACCACCTTCATGGTCCGGCCGTCTATGGGGAAGAACACTCTGCTCTCAAGATCCCACCGGAAAATTCTCTTGCGTAACCGGCGACTGTGATTCCTCCACCGTCGAATGTGCCGGAAAAAACGCAATACCACCGGCAACATTAGCTGAGTTTACACTCAACGGCGACGGCGGACTTGATTTCTTCGACGTTAGTCTCGTCGACGGTTACAATCTCCCCATGTTGATCGAACCTCACGGTGAAACCGGCGGCGGAAACTGTACCACGACGGGTTGTTCTGTTGACTTGAACGTAGCATGTCCGTCGGAATTGAAAGTTATGAGTAGCGACGGAGGTGTGGGAGTCGCGTGTAAAAGCGCGTGTGAAGCTTTTGGGGATCCACAGTATTGCTGTAGTGGCGATTTTAATACGCCAGCTACATGTAAACCAAGTTCATACTCGCAGTTTTTTAAGAGTGCATGTCCACGCGCTTATAGTTATGCTTATGATGATGGAACTAGCACTTTCACTTGTGCTTCTGCTGATTATACCATCACTTTTTGCCCCACCATACCCTCCACAAGTCCAATAAAGTCTGGGAATGAGAAATATCCAACACCGGTGTCTGATGTGTCAGGTGTATCTGGTGTTCGACATGTAAAGACGGTCAACAATGTTGTGAGGAGTGTTGTTGCTTTTGTTTTGATAGGTTTGGTGGTTGATCAGTTATAA 912 0.4726 MASSTQFALTLIALTLFQFLTGSYSTTFTIVNKCSYTVWPGILSGAGTPQFSTTGFALQPGESNALAAPPSWSGRLWGRTLCSQDPTGKFSCVTGDCDSSTVECAGKNAIPPATLAEFTLNGDGGLDFFDVSLVDGYNLPMLIEPHGETGGGNCTTTGCSVDLNVACPSELKVMSSDGGVGVACKSACEAFGDPQYCCSGDFNTPATCKPSSYSQFFKSACPRAYSYAYDDGTSTFTCASADYTITFCPTIPSTSPIKSGNEKYPTPVSDVSGVSGVRHVKTVNNVVRSVVAFVLIGLVVDQL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00851 303 SMART tha2 28 249 IPR001938 -
Tsu05g00851 303 Gene3D Thaumatin 26 249 IPR037176 -
Tsu05g00851 303 SUPERFAMILY Osmotin, thaumatin-like protein 26 249 IPR037176 -
Tsu05g00851 303 PANTHER OS09G0536300 PROTEIN 12 264 - -
Tsu05g00851 303 PANTHER OS03G0233200 PROTEIN 12 264 IPR001938 -
Tsu05g00851 303 CDD TLP-PA 27 248 - -
Tsu05g00851 303 PIRSF PR5 1 291 IPR001938 -
Tsu05g00851 303 Pfam Thaumatin family 32 249 IPR001938 -
Tsu05g00851 303 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Tsu05g00851 303 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Tsu05g00851 303 PRINTS Pathogenesis-related protein signature 239 248 IPR001938 -
Tsu05g00851 303 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Tsu05g00851 303 ProSiteProfiles Thaumatin family profile. 25 249 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00851 Tsu-Chr5 7389492 7391150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00851 7 250 Receptor kinase-like Gene Family AT5G38280 51.822 2.36e-85 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00851 - - gmx:100806478 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00851 05 7389492 7391150 Tsu04g03521 04 44369339 44370680 ECH
Tsu07g00256 07 1978519 1980727 Tsu05g00851 05 7389492 7391150 ECH
Tsu05g00851 05 7389492 7391150 Tsu05g00851 05 7389492 7391150 ECH
Tsu05g00851 05 7389492 7391150 Tsu04g03521 04 44369339 44370680 PCT