Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03521 ATGGAAGCTTCAACTCAAATTTCTATAACTCTTATCTTTCTATTTCTCTTTCATTCCTTAAGAGGTTTACATTCAGCCACATTTACAATTGTAAACAAGTGTAGCTACCCTGTTTGGCCGGGGATTTTGTCCGGTGCCGGAACGGCACAATTAGCCACAACGGGCTTCGTGCTACAACCGGACGAGTCCAACGCTATCACTATGCCCGTAGCTTGGTCTGGCCGAATATGGGGTCGAACACTATGTTCAACAGATTCCACCGGAAAATTTTCCTGCATCACCGGAGACTGCGGCTCTTCTAAGGTAGAATGCACTGGCAGCGGTGCTATCCCGCCTGCAACACTCGCGGAGTTCACCTTGAACGGTGCTGGAGGAATGGATTTCTACGACGTCAGCCTGGTTGACGGTTACAACCTTCCCATGTTGGTAGAACCGCGTGGCAGCGGAGGAAACTGCACGACAGCAGGTTGTTCGGTGGACTTAAACGGATGGTGTCCGACAGAGCTGAAGGTGAAAGTTGCAGTGGAAGGAGAAGGAAATGGTGAGAAGAGTGTGGCATGTAAAAGTGCATGTGAAGCATTTGGGGATCCATTATACTGCTGCAGTGGAGCTTATGCCACTCCGCAGACATGTAAACCAAGTTCGTACTCACAACTCTTCAAGAGCGCATGCCCGCGCGCTTATAGCTATGCCTATGACGATGGCACTAGCACCTTCACTTGTGCCTCCGCGGACTACCTCATTACTTTCTGTCCCATACATTCCAATAGTTCAATCAAGTCAGGGACCGGAAAATTCCCATTTGGAGTGGACATATGGGCAGGACACGGCCGTGGCCATGCCGATGAGCCAACCAACATGATGACACTAGTTATTGGCACTGTTCTGATGACAATTTGGTGGCAACTCAGTTAG 915 0.4951 MEASTQISITLIFLFLFHSLRGLHSATFTIVNKCSYPVWPGILSGAGTAQLATTGFVLQPDESNAITMPVAWSGRIWGRTLCSTDSTGKFSCITGDCGSSKVECTGSGAIPPATLAEFTLNGAGGMDFYDVSLVDGYNLPMLVEPRGSGGNCTTAGCSVDLNGWCPTELKVKVAVEGEGNGEKSVACKSACEAFGDPLYCCSGAYATPQTCKPSSYSQLFKSACPRAYSYAYDDGTSTFTCASADYLITFCPIHSNSSIKSGTGKFPFGVDIWAGHGRGHADEPTNMMTLVIGTVLMTIWWQLS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03521 304 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Tsu04g03521 304 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Tsu04g03521 304 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Tsu04g03521 304 PRINTS Pathogenesis-related protein signature 242 251 IPR001938 -
Tsu04g03521 304 SUPERFAMILY Osmotin, thaumatin-like protein 26 252 IPR037176 -
Tsu04g03521 304 PANTHER OS03G0233200 PROTEIN 10 268 IPR001938 -
Tsu04g03521 304 CDD TLP-PA 27 251 - -
Tsu04g03521 304 PIRSF PR5 1 271 IPR001938 -
Tsu04g03521 304 Pfam Thaumatin family 32 252 IPR001938 -
Tsu04g03521 304 ProSiteProfiles Thaumatin family profile. 25 254 IPR001938 -
Tsu04g03521 304 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 10 268 - -
Tsu04g03521 304 SMART tha2 28 252 IPR001938 -
Tsu04g03521 304 Gene3D Thaumatin 26 252 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03521 Tsu-Chr4 44369339 44370680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03521 7 252 Receptor kinase-like Gene Family AT5G38280 53.600 2.47e-88 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03521 - - gmx:100809419 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00851 05 7389492 7391150 Tsu04g03521 04 44369339 44370680 ECH
Tsu07g00256 07 1978519 1980727 Tsu04g03521 04 44369339 44370680 ECH
Tsu04g03521 04 44369339 44370680 Tsu04g03521 04 44369339 44370680 ECH
Tsu05g00851 05 7389492 7391150 Tsu04g03521 04 44369339 44370680 PCT