Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01844 ATGAGCTCTGTTGGTGGTAGATCTGCTGGAAGAGCATTTGAGTTTGGAAGAACTTATGTAGTCAGGCCTAAAGGTAAACACCAAGCAACTATAGTTTGGTTGCACGGTCTCGGGGATAATGGCTCCAGTTGGTCCCAGCTATTAGAGACCATTCCTCTTCCAAATATTAAATGGATATGTCCAACTGCTCCCACACGACCAATGTCTATATTTGGCGGCTTTCCTTCTACTGCTTGGTTTGATGTTGAAGAGCTTTCTGAAGCTGCTCCCGATGATCTAGAAGGTTTGGATGCTTCAGCGGCACATGTTGCGAATTTGTTGTCGACAGAGCCTGCAGACATTAAGCTTGGTGTTGGAGGGTTTAGCATGGGAGCAGCTACTGCCCTTTACTCAGCATCCTGCTTTACTGCTGGAAAATATGGGAATGGCAATGCTTATCCAGCCAACATAAGTGCAGCTGTTGGATTAAGTGGCTGGCTTCCATGTTCAAAGACCTTGAGTAACAAATTACAAGGGGTAGATGACGCCACAAGGCGTGCTCAGTCCTTTCCCATTTTGATGTGTCATGGAAAAGGTGATGAAGTGGTTCCATTTAAGTTTGGTGAGAAATCATCTAAGTGCTTAAGTGCTAATGGATTTCAGGATGTAACTTTTAAAGCTTATAATGGGCTTGGCCACTACACAATTCCAGAAGAGACGGACGATGTTTGTGCTTGGCTAACATCAAAATTGGGACTCGAAGGCAATGCTGCCTAG 756 0.4484 MSSVGGRSAGRAFEFGRTYVVRPKGKHQATIVWLHGLGDNGSSWSQLLETIPLPNIKWICPTAPTRPMSIFGGFPSTAWFDVEELSEAAPDDLEGLDASAAHVANLLSTEPADIKLGVGGFSMGAATALYSASCFTAGKYGNGNAYPANISAAVGLSGWLPCSKTLSNKLQGVDDATRRAQSFPILMCHGKGDEVVPFKFGEKSSKCLSANGFQDVTFKAYNGLGHYTIPEETDDVCAWLTSKLGLEGNAA 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01844 251 Gene3D alpha/beta hydrolase 11 245 IPR029058 -
Tsu06g01844 251 SUPERFAMILY alpha/beta-Hydrolases 19 244 IPR029058 -
Tsu06g01844 251 Pfam Phospholipase/Carboxylesterase 19 240 IPR003140 GO:0016787
Tsu06g01844 251 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 2 249 - -
Tsu06g01844 251 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 2 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01844 Tsu-Chr6 22068401 22077861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01844 6 248 Acyl Lipid Metabolism Gene Families AT5G20060 74.074 2.71e-139 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01844 K06130 - gmx:100791683 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01844 06 22068401 22077861 Tsu06g00233 06 1909878 1914218 ECH
Tsu06g01844 06 22068401 22077861 Tsu02g05520 02 63529935 63533009 ECH
Tsu06g01844 06 22068401 22077861 Tsu06g01844 06 22068401 22077861 ECH