Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00233 ATGAACTATGAATATCAAATTGGGTCTGGTAGTACTGCTAGAAGAACTTTGGAGTTTGGTAAGACACATGTAGTGAGGCCTAAAGGAAAACATGAAGCCACTATAGTTTGGCTGCATGGTCTTGGTGATAATGGTTTGAGctcATATCAGCTCCTTGAATCACTTCCACTTCCAAATATAAAATGGATTTGTCCAACTGCTCCTATCCGCTCTGTAGCTATACTTGGTGGTTTTTCTTGCAATGCATGGTTTGATATGGGAGAACTTTCAGAAGATGGTCCAGTTGATTGGGAAGGTTTAGATGTCACATCCAAACATATTGCTAATTTGTTGTCAGCTGAGCCATTTGATGtGAAAGTTGGGATTGGAGGCTTTAGTATGGGTGCTGCAACAGCTCTATACTCTGCAACTTGTTTTGCCATGGGAAAGTATGGAAATGGCATCCCCTACCTTATCAACTTAAGAGCAGTTATTGGACTAAGTGGTTGGCTTCCAGGATCAAGGACCTTAACCAGCAGGATAGAAATGTCAGACGATGCAAGAAGGAGAGCTGCTTCATTACCGGTTTTTCTGAGCCATGGAATTAGTGATGATGTAGTTCCTTACAAATATGGAGAGAAATCAGCCCAATCTTTGAGTTCAGCAGGGTTTCaatatataacatttaaatCCTATGATGgAGTTGGTCATTATACAGTTCCTAGCGAGATGGCTGAGGTTTCCAATTGGCTTGGTTCAAGGTTGGGACTTGAGGGAACCTTATAA 765 0.4078 MNYEYQIGSGSTARRTLEFGKTHVVRPKGKHEATIVWLHGLGDNGLSSYQLLESLPLPNIKWICPTAPIRSVAILGGFSCNAWFDMGELSEDGPVDWEGLDVTSKHIANLLSAEPFDVKVGIGGFSMGAATALYSATCFAMGKYGNGIPYLINLRAVIGLSGWLPGSRTLTSRIEMSDDARRRAASLPVFLSHGISDDVVPYKYGEKSAQSLSSAGFQYITFKSYDGVGHYTVPSEMAEVSNWLGSRLGLEGTL 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00233 254 Pfam Phospholipase/Carboxylesterase 22 244 IPR003140 GO:0016787
Tsu06g00233 254 Gene3D alpha/beta hydrolase 12 249 IPR029058 -
Tsu06g00233 254 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 6 252 - -
Tsu06g00233 254 SUPERFAMILY alpha/beta-Hydrolases 23 248 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00233 Tsu-Chr6 1909878 1914218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00233 7 252 Acyl Lipid Metabolism Gene Families AT5G20060 64.634 9.62e-122 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00233 K06130 - gmx:100782153 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00233 06 1909878 1914218 Tsu02g05520 02 63529935 63533009 ECH
Tsu06g01844 06 22068401 22077861 Tsu06g00233 06 1909878 1914218 ECH
Tsu06g00233 06 1909878 1914218 Tsu06g00233 06 1909878 1914218 ECH
Tsu02g05520 02 63529935 63533009 Tsu06g00233 06 1909878 1914218 PCT