Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05520 ATGAGTCATACACATTCGCATACCGGTTCTGGTAGTAGAACTAATCGGCGAGCTTTCGAGTTTGGAAAGACGCATGTAGTGAGGCCTAAAGGAAAACATCAAGCTACTATAGTTTGGCTACATGGACTTGGTGATAATGGTTTGAGTGCATCTCAGTTGCTGGAATCACTTCCACTTCCAAATATAAAATGGATTTGCCCTACTGCTCCTACCCGTCCTGTAGCGGTACTTGGTGGTTTTCCTTGCACTgcatGGTTTGATGTGGGAGAACTTTCAGAAGATGGTCCAGATGATTGGGAGGGTTTAGATGCATCAGCATCACATATTGCTAACTTGTTGTCAACAGAGCCAGCTGATGTAAAAGTTGGTATTGGAGGGTTTAGCATGGGTGCAGCAATAGCATTATACTCTGCAACATGCTATGCCATGGGAAGGTATAGTAATGGCATTCCATACCCTGTCAGTTTAAGAGCAATTGTTGGACTCAGTGGTTGGCTTCCAGGATCAAGGAGCTTAGGAAACAAGATAGAAGTATCACATGAGGCACGAAGGCGAGCTGCTTCGTTACCGATTTTACAGTGTCATGGAATCAGTGATGATGTAGTACACTGCAAGTATGGAGAGAAATCTGCACAATCCTTAAGCTCAGCAGGATTTCGATATGTCGCATTCAAATCCTATGAAGGGCTTGGTCATTACACAGTTCCAAGAGAGATGGGTGAAGTTTCCACCTGGCTTAGTTCAAGGTTGGGACTTGAAGGATTTTCGGCGTAA 774 0.4406 MSHTHSHTGSGSRTNRRAFEFGKTHVVRPKGKHQATIVWLHGLGDNGLSASQLLESLPLPNIKWICPTAPTRPVAVLGGFPCTAWFDVGELSEDGPDDWEGLDASASHIANLLSTEPADVKVGIGGFSMGAAIALYSATCYAMGRYSNGIPYPVSLRAIVGLSGWLPGSRSLGNKIEVSHEARRRAASLPILQCHGISDDVVHCKYGEKSAQSLSSAGFRYVAFKSYEGLGHYTVPREMGEVSTWLSSRLGLEGFSA 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05520 257 SUPERFAMILY alpha/beta-Hydrolases 25 250 IPR029058 -
Tsu02g05520 257 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 254 - -
Tsu02g05520 257 Gene3D alpha/beta hydrolase 14 251 IPR029058 -
Tsu02g05520 257 MobiDBLite consensus disorder prediction 1 20 - -
Tsu02g05520 257 Pfam Phospholipase/Carboxylesterase 24 247 IPR003140 GO:0016787
Tsu02g05520 257 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 254 - -
Tsu02g05520 257 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05520 Tsu-Chr2 63529935 63533009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05520 1 254 Acyl Lipid Metabolism Gene Families AT5G20060 66.142 1.73e-127 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05520 K06130 - gmx:100798395 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00233 06 1909878 1914218 Tsu02g05520 02 63529935 63533009 ECH
Tsu06g01844 06 22068401 22077861 Tsu02g05520 02 63529935 63533009 ECH
Tsu02g05520 02 63529935 63533009 Tsu02g05520 02 63529935 63533009 ECH
Tsu02g05520 02 63529935 63533009 Tsu06g00233 06 1909878 1914218 PCT