Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00489 ATGACCCAGATGATGAAAAACTCAATTCCATGGCCAACAATCATGGTAGTGATTTCTTGGTACAGTTCAAATATTGGGGTGCTTCTTATGAACAAGTACTTATTAAGCAACTATGGTTACAGATTTCCTGTTTTTCTCACCATGTGTCACATGATGTTGTGTTCTGTTTTCAGTTACGTTGGAATTTATGTTATGGATATTGTACCTTTGCAGAGTGTTCAATCTAAGAATCAGTTGTTCAAAATCTGTGGATTaagtgttgttttttgtttctctgTTGTTTGTGGGAACATTTCTCTTAATTATATTCCGGTGTCGTTTAATCAAGCTATTGGAGCTACTACACCTTTTTTTACTGCTGTTTTTGCTTATTTTGTGAGTAGAAAAAGAGAAGCTTGGGTTACTTATGGTACCCTTTTGCCTGTTGTTACTGGTGTCATCATTGCTAGTGGGGGTGAACCAAGTTTTCATCTATTTGGATTTATAATCTGTGTTTCATCAACAGCTGCCAGAGCATTTAAATCAGTGCTTCAATCTATTTTATTGTCCTCAGAAGGAGAAAAATTAGATTCAATGAACCTGCTGCTTTATATGGCACCTATAGCAATGATGGTGTTACTTCCTGCAACATTGTTGATGGAGGGAAACGTGCTTCGGATGACAATAGAACTTGCCAGAGAGGATTTCAGAATTATTTGGTATCTGCTTTTGAGTTCATCTCTTGCATATTTTGTCAACCTCACTAATTTTTTGGTCACCAAATATACAAGTGCTCTTACCCTTCAGGTGTTAGGAAATGCAAAGGGAGCAGTTGCTGTGGTGATctcaattttgatatttcaaaatcCAATTTCAATGATAGGAATGCTTGGCTATGTACTCACTATCATTGGAGTTATATTGTACAGTGAAACCAAGAAGAGATATAGTACTTAG 936 0.3504 MTQMMKNSIPWPTIMVVISWYSSNIGVLLMNKYLLSNYGYRFPVFLTMCHMMLCSVFSYVGIYVMDIVPLQSVQSKNQLFKICGLSVVFCFSVVCGNISLNYIPVSFNQAIGATTPFFTAVFAYFVSRKREAWVTYGTLLPVVTGVIIASGGEPSFHLFGFIICVSSTAARAFKSVLQSILLSSEGEKLDSMNLLLYMAPIAMMVLLPATLLMEGNVLRMTIELAREDFRIIWYLLLSSSLAYFVNLTNFLVTKYTSALTLQVLGNAKGAVAVVISILIFQNPISMIGMLGYVLTIIGVILYSETKKRYST 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00489 311 Pfam Triose-phosphate Transporter family 15 303 IPR004853 -
Tsu06g00489 311 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 6 310 - -
Tsu06g00489 311 PANTHER SOLUTE CARRIER FAMILY 35 6 310 - -
Tsu06g00489 311 SUPERFAMILY Multidrug resistance efflux transporter EmrE 74 152 - -
Tsu06g00489 311 SUPERFAMILY Multidrug resistance efflux transporter EmrE 202 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00489 Tsu-Chr6 4142870 4145083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00489 13 308 Organic Solute Cotransporters AT5G05820 74.662 2.32e-166 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00489 - - gmx:100799632 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00489 06 4142870 4145083 Tsu03g01780 03 18292173 18298507 ECH
Tsu06g00489 06 4142870 4145083 Tsu05g03279 05 44150892 44155015 ECH
Tsu06g00489 06 4142870 4145083 Tsu06g00489 06 4142870 4145083 ECH
Tsu06g00489 06 4142870 4145083 Tsu03g00961 03 8884479 8886597 ECH