Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00961 ATGCCACCAGTATCTGGAAAACTATTCACCGTTAGTTTGATAAGTTTCTGGTATGCATCAAACATTGGAGTATTACTATTAAACAAGTACCTTTTAAGCAATTATGGTTTCAAATACCCAATATTCTTAACATTATGTCACATGATGGCATGTTCAATGCTAAGTTACATTGCAATATCATGGATGAAAATGGTGCCATTACAAACGGTAAGATCAAGGGTACAATTTGTGAAGATATCATCACTTGGACTTATATTCTGTTTGTCTGTTGTTGGAGGGAATATTTCTTTGAGGTATCTTCCTGTTTCTTTTAATCAAGCTATTGGTGCTACGACGCCGTTTTTTACGGCGATTTTTGCTTATCTTATGACCCTTAAGAGGGAAGGTTGGCTTACTTATATGGCTCTTGTTCCTGTTGTTACTGGCGTTATGATTGCTAGTGGGGGAGAACCAAGTTTTCATCTATTTGGATTTATAATGTGCATCAGTGCCACAGCAGCCAGGGCACTCAAAACAGTCCTTCAAGGGGTCTTGCTGTCTTCTGAAGCGGAAAAGCTGAATTCTATGAACCTTCTTATGTACATGGCACCAGTGGCTGTTGCATTCCTTCTTCCTGCTTCAATTATAATGGAGGAAAATGTTCTTGGAATTACAATTCAACTTGCTAGAGAAGATTCAACTATTGTGTGGTTACTTCTCTTCAACTCTGCATTGGCATATTTTGTCAACTTGACCAATTTCTTAGTTACAAAGCACACCAGTGCATTAACACTTCAGGTCCTAGGAAATGCAAAAGGAGCTGTGGCAGTTGTTATCTCTATTTTGATATTTAGAAATCCTGTATCAATAACTGGAATGTTAGGATATTCTCTTACAGTCATTGGAGTTATCCTATATAGTGAAGCCAAGAAGCGAAGTAAAAGAGAAAGAGATACTTGA 939 0.3759 MPPVSGKLFTVSLISFWYASNIGVLLLNKYLLSNYGFKYPIFLTLCHMMACSMLSYIAISWMKMVPLQTVRSRVQFVKISSLGLIFCLSVVGGNISLRYLPVSFNQAIGATTPFFTAIFAYLMTLKREGWLTYMALVPVVTGVMIASGGEPSFHLFGFIMCISATAARALKTVLQGVLLSSEAEKLNSMNLLMYMAPVAVAFLLPASIIMEENVLGITIQLAREDSTIVWLLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVISILIFRNPVSITGMLGYSLTVIGVILYSEAKKRSKRERDT 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00961 312 Pfam Triose-phosphate Transporter family 12 300 IPR004853 -
Tsu03g00961 312 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 149 - -
Tsu03g00961 312 PANTHER SOLUTE CARRIER FAMILY 35 7 306 - -
Tsu03g00961 312 SUPERFAMILY Multidrug resistance efflux transporter EmrE 223 303 - -
Tsu03g00961 312 PANTHER - 7 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00961 Tsu-Chr3 8884479 8886597 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00961 5 307 Organic Solute Cotransporters AT3G11320 83.168 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00961 - - gmx:100803533 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00961 03 8884479 8886597 Tsu03g00961 03 8884479 8886597 ECH
Tsu03g00961 03 8884479 8886597 Tsu03g01780 03 18292173 18298507 ECH
Tsu03g00961 03 8884479 8886597 Tsu05g03279 05 44150892 44155015 ECH
Tsu06g00489 06 4142870 4145083 Tsu03g00961 03 8884479 8886597 ECH