Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03279 ATGAAAGAATCAAGCAAAACATTCACAATATTATTAATCTCATCATGGTATTCATCAAACATTGGTGTATTACTCTTAAACAAATATCTCCTAAGTAACTATGGTTTCAAATACCCAATTTTCTTAACCATGTGTCACATGACAGCATGTTCTTTATTCAGCTATATTGCAATTGCTTGGTTTAAAATGGTTCCAATGCAATTCATTCGTTCTAatcttcaatttttcaaaattgctACTTTGAGTTTAGTTTTTTGTGTTTCCGTCGTTTTTGGTAATATTTCCCTACGGTATCTTCCTGTGTCGTTTAATCAAGCTGTTGGTGCTACTACTCCTTTTTTTACTGCTGTTTTTGCTTATCTTATGACTTTTAAGAGAGAAGCTTTTCTTACTTATCTTGCTCTTGTTCCTGTTGTTACTGGTGTTATCATTGCTAGTGGGGGTGAACCAAGCTTCCATTTGTTTGGTTTCATAATATGTGTCGCAGCTACAGCAGCACGAGCCCTAAAAACAGTGTTACAAGGAATTTTACTTTCTTCTGAAGGGGAGAAGCTGAATTCTATGAACCTTCTGCTGTACATGGCTCCAATGGCTGTTGTTTTCCTTCTTCCTGCTGCACTTTATATGGAAGAAAATGTGGTTGGCATCACGTTGGCTCTTGCCAGAGATGATCCGAAGATCATTTGGTACCTTTTATTCAACTCCTCACTAGCATACTTTGTCAACCTGACCAATTTTTTGGTCACGAAACACACCAGTGCTCTCACCCTTCAGGTATGGCTCCCTTTTTCATACAGTCGTACAACTTTGTtttctaaatttgtttttactcaAACGATCATGCCTTGCCTGCTGTCTTTTTGGTTGGAACATCAATTATGTGCGATTTTTATTAACGAGTTTCTTAAAATTCACGAGTAA 921 0.3572 MKESSKTFTILLISSWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLFSYIAIAWFKMVPMQFIRSNLQFFKIATLSLVFCVSVVFGNISLRYLPVSFNQAVGATTPFFTAVFAYLMTFKREAFLTYLALVPVVTGVIIASGGEPSFHLFGFIICVAATAARALKTVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPAALYMEENVVGITLALARDDPKIIWYLLFNSSLAYFVNLTNFLVTKHTSALTLQVWLPFSYSRTTLFSKFVFTQTIMPCLLSFWLEHQLCAIFINEFLKIHE 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03279 306 Pfam Triose-phosphate Transporter family 10 259 IPR004853 -
Tsu05g03279 306 PANTHER SOLUTE CARRIER FAMILY 35 5 260 - -
Tsu05g03279 306 PANTHER - 5 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03279 Tsu-Chr5 44150892 44155015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03279 1 259 Organic Solute Cotransporters AT3G11320 85.328 1.12e-162 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03279 - - gmx:100806704 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01780 03 18292173 18298507 Tsu05g03279 05 44150892 44155015 ECH
Tsu06g00489 06 4142870 4145083 Tsu05g03279 05 44150892 44155015 ECH
Tsu03g00961 03 8884479 8886597 Tsu05g03279 05 44150892 44155015 ECH
Tsu05g03279 05 44150892 44155015 Tsu05g03279 05 44150892 44155015 ECH
Tsu03g01780 03 18292173 18298507 Tsu05g03279 05 44150892 44155015 PCT