Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00334 atgcctCCAAATCCACCAAAATCTTCTCTCCTCCTCCACAGGATCAAccacaccaccaccaccaccacgaCCGTCACCAACCACCACGCCGAAAACAACAACATCCTCTTCGTCAACCCCGTCGCCACTACCATCCCTAATACCATAGCACACTACCACACACACCCGGTATCCTCCAACCAACTATGCTCTGTGGTCATTCAAGAAACAACCGCTCCCATCTCGGCCGTTTGGTCTGTCGTTCGCCGCTTCGACAAACCACAAGCCTACAAAAATTTCATCAAGAGTTGTAGTCTCATCGGTGGCGACGGTGATGTGGGCACAGTCAGGGAGGTCAACCTTATATCTGGACTCCCTGCTGCCCGCAGCACCGAACGCCTTGAGATCCTTGACGAGGAGCGTCATGTCATTAGTTTTAGCGTTGTTGGTGGGGACCACCGGCTTGCTAACTACTGTTCCGTTACTACACTTCATCCCTGCGCTACTAGTGACGGTTCTGGCACGGTGATTGTTGAGTCCTACGTGGTGGATATTCCGTCAGAAAATACTAAAGAGGACACACGAGTGTTTGTTGATACAATTGTTCGGTGTAACCTTCAATCACTTGCACAAAATGCAGAGAACATTAAGCAACAAAAGAACAATGATCATCACAAGGgttgttcttga 669 0.4634 MPPNPPKSSLLLHRINHTTTTTTTVTNHHAENNNILFVNPVATTIPNTIAHYHTHPVSSNQLCSVVIQETTAPISAVWSVVRRFDKPQAYKNFIKSCSLIGGDGDVGTVREVNLISGLPAARSTERLEILDEERHVISFSVVGGDHRLANYCSVTTLHPCATSDGSGTVIVESYVVDIPSENTKEDTRVFVDTIVRCNLQSLAQNAENIKQQKNNDHHKGCS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00334 222 Gene3D - 17 220 IPR023393 -
Tsu06g00334 222 CDD PYR_PYL_RCAR_like 64 207 - -
Tsu06g00334 222 PANTHER - 29 213 - -
Tsu06g00334 222 SUPERFAMILY Bet v1-like 66 205 - -
Tsu06g00334 222 Pfam Polyketide cyclase / dehydrase and lipid transport 69 207 IPR019587 -
Tsu06g00334 222 PANTHER ABSCISIC ACID RECEPTOR PYL4-LIKE 29 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00334 Tsu-Chr6 2781001 2781935 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00334 K14496 - tcc:18597464 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00334 06 2781001 2781935 Tsu03g01907 03 19743750 19746848 ECH
Tsu06g00334 06 2781001 2781935 Tsu05g03378 05 45133252 45134635 ECH
Tsu06g00334 06 2781001 2781935 Tsu06g00334 06 2781001 2781935 ECH