Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03378 ATGCCTTCATCTATTCAGCTTCAAAGATTCAACACTAACACAGAAACTGCCTCCGTTAATTTCATAGCTAACGGCGTTAGCTGTCcaaaacaaatccaacaaacGCGTCGTTACGCGCTTTCAACGGAAAAAATAACCGTTTCCGATACGGTTTCGAACCACCACACACACGTGGTGGGACCACACCAGTGCTACTCCGTCGTGATCCAAAAAATCAACGCCTCCGTTTCAACCGTTTGGTCCGTTGTTCGACGATTTGATAATCCACAAGGATACAAAAACTTTGTGAAAAGCTGCAACGTTGTCGCCGGCGATGGCATTCGTGTCGGTGCTCTCCGTGAAGTTCGGTTGGTTTCTGGTTTACCTGCTGTTTCGAGTACTGAGAGGTTAGATATACTTGATGAAGAACGCCACGTCATCAGTTTCAGTGTTGTTGGTGGTGTTCATCGGCTTAGAAATTATCGATCGGTGACGACGCTTCACGGTGACGGTAATGGAGGAACGGTGGTGATTGAATCGTATGTTGTTGATGTACCGTGCGGTAACACAAAGGAAGAAACATGTAGTTTTGTTGATACCATTGTTCGGTGTAATTTGCAGTCATTAGCTCAGATCGCCGAAAAACTCTGA 630 0.446 MPSSIQLQRFNTNTETASVNFIANGVSCPKQIQQTRRYALSTEKITVSDTVSNHHTHVVGPHQCYSVVIQKINASVSTVWSVVRRFDNPQGYKNFVKSCNVVAGDGIRVGALREVRLVSGLPAVSSTERLDILDEERHVISFSVVGGVHRLRNYRSVTTLHGDGNGGTVVIESYVVDVPCGNTKEETCSFVDTIVRCNLQSLAQIAEKL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03378 209 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 30 208 - -
Tsu05g03378 209 PANTHER - 30 208 - -
Tsu05g03378 209 CDD PYR_PYL_RCAR_like 64 207 - -
Tsu05g03378 209 Gene3D - 27 209 IPR023393 -
Tsu05g03378 209 Pfam Polyketide cyclase / dehydrase and lipid transport 70 207 IPR019587 -
Tsu05g03378 209 SUPERFAMILY Bet v1-like 67 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03378 Tsu-Chr5 45133252 45134635 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03378 K14496 - gmx:100798803 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01907 03 19743750 19746848 Tsu05g03378 05 45133252 45134635 ECH
Tsu06g00334 06 2781001 2781935 Tsu05g03378 05 45133252 45134635 ECH
Tsu05g03378 05 45133252 45134635 Tsu05g03378 05 45133252 45134635 ECH
Tsu03g01907 03 19743750 19746848 Tsu05g03378 05 45133252 45134635 PCT