Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02814 ATGGGTAGCTATAGAGTCTGTGTGTGTTTCCGGCGGAGGTTTAAGTCAGGGGAGGCGGTGGCGCCTCAGGAGGTTCGTGAGCTGTTCAACAAGTATGCTGAAGGTGGGGCTCATATGACTTCTGACCAGCTTAGACAGTTTCTGGCCGAGGTTCAAGGCGAGGTTGATGAGAAGGATGAACTCGACACGCAGAAGGTGGTACAGGAAGTGTTGCAGAAGCGGCATCATATTACTAAGTTCGCGAGGCATAACCTTACACTTGATGATTTTCATCATTACCTCTTTTCTACTGAATTTAATTCCCCTATCAGATCTCAGGTTAATCAGGATATGACAGCTCCATTGTCCCATTATTTCATATATACTGGTCATAACTCTTATCTCACTGGAAATCAACTCAGCAGTGATTGTAGTGATGTTCCAATTATTAAGGCATTGAAAAGAGGTGTGAGAGTTGTTGAACTTGATATTTGGCCTAATTCCAACAAAGATGATGTTCTTGTTTTACATGGAAGGACATTGACAACACCTGTGGATTTGATCAAATGTTTGAAATCGATTAAAGAGCATGCTTTCGCTGCATCTCCCTATCCAGTCATAATTACGTTGGAAGATCATCTTACACAAGATCTTCAAGCAAAAGCTGCTCAGATGATATCTCAAACATTTGGAGATATGCTTTTCTGTCCAAATGACGAAAGCTTGAACAATGTTCCGTCACCTGAAGAACTGAAGTATAAGATCATGATATCAACAAAACCTCCAAAAGAGTACTTAGATTCTAAAAGTGTGAGGGAGAGTTCAAAACAATTGctgaaatcaaaatcaaaggattctgatgaagatgaatggGGAAAAGTAGGCAACGATGTTGCTAATACACAAAATGAAGATGATAAGGGTGATTTTGAATCAATTCAATAcaatcatgatgatgatgatgaattaaaTGATGATGAATATGAAACAAATCAGGAAAGTGAATATAAGCGTCTAATCGCTATTCGTGCTGGAAAACCTAAGGGTAGTCTTAAGGAAGCCTTAAAAGTTGAAGAGGATAAAGTGAGACGCCTTAGCTTAAGCGAACAAGAGATTGAAAAGGCTTCTGAGTCGCTCGGAACTGATCTTATCAGATTCACTCAGAAAAACTTCTTGAGGATATATCCGAAGGGTACACGGGTGACCTCATCCAACTACAAGCCATTTGTTAGCTGGATGCATGGTGCTCAAATGGTTGCATTCAATATGCAAGGTTATGGAAGAAATCTTTGGTTGATGCATGGAATGTTTAGATCCAACGGAGGATGCGGTTATGTGAAAAAGCCAGATTTTCTTATGAATGTAGGTCCTAATAATGAGGTATTCAATCCTAAAGATAAATTAGAAGTGAAGAAAACTCTTAAGGTGAAAATATATTTGGGAGATGGATGGAGTATGGATTTCAAACAAACTCACTTTGACTCATATTCTCCACCAGATTTTTATGCCAGGGTTGGCATAGCTGGAGTACCAGCTGATGTAACaatgaagaaaacaaagatAATAGAAGATAATTGGATACCAACTTGGGAAGAAGAATTTACATTCCCTTTAACTGTACCTGAACTTGCTTTACTCAGAGTGGAAGTGCATGAATATGACATGTCTGAGACAGATGATTTTGCAGGCCAAACTTGTTTACCAATCATTGAACTAAAACAAGGGATTCGCGCCGTTCCACTCTATGACCGAAAAGGAGAAAAGTACAACTCAaATCAATTGATTGTGGTATTTGGTGATTTCCTGTTTCAGATTTGA 1797 0.3767 MGSYRVCVCFRRRFKSGEAVAPQEVRELFNKYAEGGAHMTSDQLRQFLAEVQGEVDEKDELDTQKVVQEVLQKRHHITKFARHNLTLDDFHHYLFSTEFNSPIRSQVNQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSNKDDVLVLHGRTLTTPVDLIKCLKSIKEHAFAASPYPVIITLEDHLTQDLQAKAAQMISQTFGDMLFCPNDESLNNVPSPEELKYKIMISTKPPKEYLDSKSVRESSKQLLKSKSKDSDEDEWGKVGNDVANTQNEDDKGDFESIQYNHDDDDELNDDEYETNQESEYKRLIAIRAGKPKGSLKEALKVEEDKVRRLSLSEQEIEKASESLGTDLIRFTQKNFLRIYPKGTRVTSSNYKPFVSWMHGAQMVAFNMQGYGRNLWLMHGMFRSNGGCGYVKKPDFLMNVGPNNEVFNPKDKLEVKKTLKVKIYLGDGWSMDFKQTHFDSYSPPDFYARVGIAGVPADVTMKKTKIIEDNWIPTWEEEFTFPLTVPELALLRVEVHEYDMSETDDFAGQTCLPIIELKQGIRAVPLYDRKGEKYNSNQLIVVFGDFLFQI 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02814 598 SUPERFAMILY EF-hand 9 111 IPR011992 -
Tsu05g02814 598 Gene3D - 20 103 - -
Tsu05g02814 598 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 3 591 - -
Tsu05g02814 598 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 356 444 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Tsu05g02814 598 SMART plcy_3 329 446 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Tsu05g02814 598 SUPERFAMILY PLC-like phosphodiesterases 109 447 IPR017946 GO:0006629|GO:0008081
Tsu05g02814 598 MobiDBLite consensus disorder prediction 259 307 - -
Tsu05g02814 598 Gene3D Phosphatidylinositol (PI) phosphodiesterase 106 458 IPR017946 GO:0006629|GO:0008081
Tsu05g02814 598 SMART C2_3c 466 574 IPR000008 -
Tsu05g02814 598 CDD C2_PLC_like 464 582 - -
Tsu05g02814 598 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 109 253 - -
Tsu05g02814 598 Pfam Phosphoinositide-specific phospholipase C, efhand-like 23 98 IPR015359 -
Tsu05g02814 598 Pfam Phosphatidylinositol-specific phospholipase C, X domain 111 253 IPR000909 -
Tsu05g02814 598 MobiDBLite consensus disorder prediction 259 318 - -
Tsu05g02814 598 SMART plcx_3 109 253 IPR000909 -
Tsu05g02814 598 CDD PI-PLCc_plant 109 433 - -
Tsu05g02814 598 PRINTS Phospholipase C signature 140 160 IPR001192 GO:0035556
Tsu05g02814 598 PRINTS Phospholipase C signature 384 405 IPR001192 GO:0035556
Tsu05g02814 598 PRINTS Phospholipase C signature 237 254 IPR001192 GO:0035556
Tsu05g02814 598 PRINTS Phospholipase C signature 114 132 IPR001192 GO:0035556
Tsu05g02814 598 PRINTS Phospholipase C signature 560 570 IPR001192 GO:0035556
Tsu05g02814 598 PRINTS Phospholipase C signature 405 423 IPR001192 GO:0035556
Tsu05g02814 598 ProSiteProfiles C2 domain profile. 440 576 IPR000008 -
Tsu05g02814 598 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 3 591 IPR001192 GO:0035556
Tsu05g02814 598 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 466 587 IPR035892 -
Tsu05g02814 598 Gene3D C2 domain 461 593 IPR035892 -
Tsu05g02814 598 Pfam C2 domain 467 568 IPR000008 -
Tsu05g02814 598 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 359 445 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02814 Tsu-Chr5 38354427 38361496 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02814 1 591 Acyl Lipid Metabolism Gene Families AT5G58700 62.626 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02814 K05857 - cit:102623592 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02814 05 38354427 38361496 Tsu05g02814 05 38354427 38361496 ECH
Tsu05g02814 05 38354427 38361496 Tsu03g01872 03 19331105 19335402 ECH
Tsu05g02814 05 38354427 38361496 Tsu05g03340 05 44701228 44705710 ECH