Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02227 ATGGCAATTCAATCATCTCAGCTAGCCATTGAACAACTGAAGAAACTTCTCAGAGAGAAGGAGGAACTTAATGAAGTGGTCACAACAAAAATTGAGGAGCTTATAGTTGAGTTACAGGGATGTCATCATCCTCATCCAATTAACCCTGCTGAACAGAGAATCATTGATGGTTTTACTTGCTTCAAGCTCAACAATTTCGACAAGAACCCGGAATTGTATGAACGACTTGCTATGGGACAATCCCCCAAGTTTATGGTATTTGCTTGCTCTGACTCTAGAGTGAGTCCTTCAGTTATCTTGAACTTTCAACCTGGTGAAGCTTTCGTGGTCCGAAACATTGCTAACATGATCCCTGCGTTTAATCAGTTAAGATACAGTGGAGTAGGTGCAACAATTGAGTATGCTATTACAGCTCTAAAGGTTGAGAACATTTTGGTTATCGGACATAGTCGCTGCGGCGGAATATCAAGACTTATGAGTCATCCTGAGGATGGATCTATTCCATATGACTTCATAGATGATTGGGTGAAAATTGGTTTACCTGCCAAAGTCAAGGTCCTAAGAGAATATGAAGGCTATGATTTCAAAGAACAATGCAAATTCTGTGAATTGGAATCGGTGAATAACTCATTGGTGAACCTGCATACATATCCATATGTTGATAGAGAAATAAGGAACAAGAAGTTAGTACTATTGGGGGGATACTATGATTTTGTGAATGGAGAATTCAAGCTTTGGAAGTATAAGTCTGTTGTTACTAAACCCATTGCCATTCCCCTCAAAACCAATGACTTGACTATCTAA 804 0.393 MAIQSSQLAIEQLKKLLREKEELNEVVTTKIEELIVELQGCHHPHPINPAEQRIIDGFTCFKLNNFDKNPELYERLAMGQSPKFMVFACSDSRVSPSVILNFQPGEAFVVRNIANMIPAFNQLRYSGVGATIEYAITALKVENILVIGHSRCGGISRLMSHPEDGSIPYDFIDDWVKIGLPAKVKVLREYEGYDFKEQCKFCELESVNNSLVNLHTYPYVDREIRNKKLVLLGGYYDFVNGEFKLWKYKSVVTKPIAIPLKTNDLTI 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02227 267 SMART Pro_CA_2 77 247 IPR001765 GO:0004089|GO:0008270
Tsu03g02227 267 Coils Coil 3 37 - -
Tsu03g02227 267 CDD beta_CA_cladeB 57 246 IPR045066 GO:0004089|GO:0008270
Tsu03g02227 267 Gene3D Carbonic anhydrase 43 258 IPR036874 GO:0004089|GO:0008270
Tsu03g02227 267 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 89 96 IPR015892 GO:0004089|GO:0008270|GO:0015976
Tsu03g02227 267 PANTHER CARBONIC ANHYDRASE 3 258 - -
Tsu03g02227 267 PANTHER CARBONIC ANHYDRASE 3 258 IPR001765 GO:0004089|GO:0008270
Tsu03g02227 267 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 133 153 IPR015892 GO:0004089|GO:0008270|GO:0015976
Tsu03g02227 267 SUPERFAMILY beta-carbonic anhydrase, cab 52 248 IPR036874 GO:0004089|GO:0008270
Tsu03g02227 267 Pfam Carbonic anhydrase 85 242 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02227 Tsu-Chr3 24270245 24271917 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02227 K01673 - gmx:547671 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01470 05 13977079 13989201 Tsu03g02227 03 24270245 24271917 ECH
Tsu04g02842 04 34092927 34093989 Tsu03g02227 03 24270245 24271917 ECH
Tsu03g02227 03 24270245 24271917 Tsu03g02227 03 24270245 24271917 ECH