Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02380 ATGCAAGCGCAAAAAGAAGCTCCGGCTGATATGCAATGCAAGGATAAGTTTCTTCTTCAGAGTGTAAAAACCAATGATGGTGTCAGTCCGAAAGATATCTCTGCAGATATGTTCAACAAGGAGGCAGGACATGTGGTTGAGGAGTGCAAATTGAGAGTGGTGTATGTCTCTCCGCCGCAACCACCATCTCCAGTTGCAGAGGGTTCTGAGGAAGGGTCATCGCCTAGAGGTTCTGTTTCAGAAAATGGAAATGCCAATGGTCCTGACTTCTCACAAGGAACGAGAGGATTTGCTGAACGATCCGAGGCTCAAGAAAAATCTGCAGAGGCAAGAGCTCTTATCTCAAGGCTGACTGAAGAAAAGAATAATGCAATTCAACAAACTAGCAGGCTCCGCCAGGAACTGGAGCTGCTGAAGCGTGAAGGAAACAAAAATCGTGGTGGAGTGTCATTTATCATTGTCATATTAATCGGCTTACTTGGCATAATCATAGGGTATCTCATGAAGTAG 510 0.451 MQAQKEAPADMQCKDKFLLQSVKTNDGVSPKDISADMFNKEAGHVVEECKLRVVYVSPPQPPSPVAEGSEEGSSPRGSVSENGNANGPDFSQGTRGFAERSEAQEKSAEARALISRLTEEKNNAIQQTSRLRQELELLKREGNKNRGGVSFIIVILIGLLGIIIGYLMK 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02380 169 MobiDBLite consensus disorder prediction 73 91 - -
Tsu04g02380 169 Coils Coil 100 141 - -
Tsu04g02380 169 MobiDBLite consensus disorder prediction 56 110 - -
Tsu04g02380 169 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 169 - -
Tsu04g02380 169 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 169 IPR016763 GO:0005789
Tsu04g02380 169 Gene3D Immunoglobulins 1 60 IPR013783 -
Tsu04g02380 169 ProSiteProfiles Major sperm protein (MSP) domain profile. 1 56 IPR000535 -
Tsu04g02380 169 SUPERFAMILY PapD-like 1 71 IPR008962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02380 Tsu-Chr4 26628347 26633576 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02380 - - gmx:100527687 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02380 04 26628347 26633576 Tsu04g02380 04 26628347 26633576 ECH
Tsu05g00374 05 2789663 2793387 Tsu04g02380 04 26628347 26633576 PCT
Tsu04g02380 04 26628347 26633576 Tsu05g00423 05 3191604 3193530 PCT