Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00374 ATGATGTCCACCGGTGATCTTCTCAACATCGAACCCGTCGAACTCAAGTTCACATTTGAGCTCAAGAAGCAGATCTCGTCATCTCTTCAATTATCAAATAAGACTGATAGCTATGTAGCTTTCAAGGTAAAAACGACAAATCCGAAGAAGTATTGTGTTCGTCCAAACACCGGAGTTGTTTTGCCACGATCTACATGCGATGTTATAGTTACAATGCAAGCCCAGAAGGAAGCTCCACCTGATATGCAATGCAAGGATAAGTTTCTCCTTCAAAGCGTAAGAGTAGATGATGGAGTCGACCCAAAGGACATTACTCCTGAAATGTTCAACAAGGAAGCAGGGCATGTGGTTGAGGAGTGCAAATTGAGAGTGGTGTATGTTGCTCCAACTCAACCTCCGTCTCCTGTTCCAGAAAGTTCTGAGGAAGGATCATCACCTAGAGGTTCTGCTTCTGAAAACGGAAATGCAAATGGTGCTGACTCCGCATCGACGATGAGAGCATTTACTGAACGAAACGAGTCTGCAGAGGCAAAAGCTCTTATGTCAAGGCTGACTGAAGAAAAGAATAATGCTATTCAACAAAATAACAAGCTTCGTCAGGAACTGGACCTGCTGAAACGTGAAAGCAGCAAAAGTCGTGGGGGTGCCTCAATGATCTTTGTCATATTAATTGGTTTACTTGGCATAATTATGGGGTATCTGTTGAAGAAGACCTAA 717 0.4324 MMSTGDLLNIEPVELKFTFELKKQISSSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQAQKEAPPDMQCKDKFLLQSVRVDDGVDPKDITPEMFNKEAGHVVEECKLRVVYVAPTQPPSPVPESSEEGSSPRGSASENGNANGADSASTMRAFTERNESAEAKALMSRLTEEKNNAIQQNNKLRQELDLLKRESSKSRGGASMIFVILIGLLGIIMGYLLKKT 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00374 238 MobiDBLite consensus disorder prediction 129 164 - -
Tsu05g00374 238 Coils Coil 174 208 - -
Tsu05g00374 238 PIRSF VAMP_assoc_prot 1 237 IPR016763 GO:0005789
Tsu05g00374 238 ProSiteProfiles Major sperm protein (MSP) domain profile. 7 127 IPR000535 -
Tsu05g00374 238 SUPERFAMILY PapD-like 2 142 IPR008962 -
Tsu05g00374 238 Gene3D Immunoglobulins 2 131 IPR013783 -
Tsu05g00374 238 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 2 236 IPR016763 GO:0005789
Tsu05g00374 238 MobiDBLite consensus disorder prediction 137 164 - -
Tsu05g00374 238 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 2 236 - -
Tsu05g00374 238 Pfam MSP (Major sperm protein) domain 8 112 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00374 Tsu-Chr5 2789663 2793387 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00374 - - gmx:100798247 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00374 05 2789663 2793387 Tsu05g00374 05 2789663 2793387 ECH
Tsu05g00374 05 2789663 2793387 Tsu04g02380 04 26628347 26633576 PCT