Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00423 ATGCAATGTAAAGACAAGTTTCTCTTGCAGAGTACAATAGTGGCTCCAAATACTGATGTTGATGATCTTCCAGCAGATACTTTTAATAAGGATAGTGGTAATTTAATAGAGGATTTGAAACTAAGAGTCTCATATATCACTACCTCACCCGAAGGAAGCTCTGAAGACGATGCAGCGAGGAATTCCGGACAAAAACTTGATTCCTCTTCTAGTCAGGCTGTACAGCTCCTGAAGGAAGAAAGAGACGCCGCTGCCAGACAAACGCGACAGCTTCAACAGGAACTGGACATGCTGAAAAGGCGAAGAAACCAAAGAGGCGATCCTGGCTTTTCCTTCACCTTTGCCATTTTTGTTGGTCTCCTTGGATTTTTGCTTGGCTTTctgttgaaatttttattctcTTCACCGTCTACAGAATAA 420 0.4095 MQCKDKFLLQSTIVAPNTDVDDLPADTFNKDSGNLIEDLKLRVSYITTSPEGSSEDDAARNSGQKLDSSSSQAVQLLKEERDAAARQTRQLQQELDMLKRRRNQRGDPGFSFTFAIFVGLLGFLLGFLLKFLFSSPSTE 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00423 139 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 136 IPR016763 GO:0005789
Tsu05g00423 139 Coils Coil 74 101 - -
Tsu05g00423 139 MobiDBLite consensus disorder prediction 48 76 - -
Tsu05g00423 139 Gene3D Immunoglobulins 1 49 IPR013783 -
Tsu05g00423 139 MobiDBLite consensus disorder prediction 48 88 - -
Tsu05g00423 139 SUPERFAMILY PapD-like 3 52 IPR008962 -
Tsu05g00423 139 PANTHER VESICLE-ASSOCIATED PROTEIN 2-1 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00423 Tsu-Chr5 3191604 3193530 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00423 - - aprc:113869624 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02380 04 26628347 26633576 Tsu05g00423 05 3191604 3193530 PCT