Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05390 ATGGCAAGTAATATTGTAGTGGTTTTTGATTTCGACAAAACCATTGTCGAATGTGACAGTGATAACTGGGTTGTTGATGAGTTGGGTTTCACTGATTTGTTCAATGAACTATTTCCCACTATGCCATGGAACAATCTCATGgaTAAGATGATGATGGAGCTTCATTCTCATGGAAAAACCATTGAAGATATTGTGGAAGTTTTGAAGAGGATTCCTATAAACCCTAGAATAATCCCTTCCATTAAAGCAGCATATGCTTTAGGgtGTGATTTGAGGGTTGTAAGTGATGCAAACACTTTTTTCATTGAGACAATTTTGAAGCACTTTGGAATTAGGGAATGTTTCTCTGAGATTAACACTAATCCAGGATATGTTGATGAAGAAGGAAGGTTGAGAATTTTGCCTTACCATGATCTCAATAAGCCTCCTCACAAGTGTAATTTGTGCCCTCCAAACATGTGCAAGGGTCTAATCATAAATAGAATCCAAGACTCTCTATCACCATGTGAAGAGAATAAAAGGTTTATCTATCTTGGTGATGGTAGTGGAGACTATTGTCCTAGCTTAAGGCTTAAAGAAAAAGATTTTGTGATGCCAAGGAAGAATTTTCCTGTGTGGGACTTAATTTGCAAAGACCCTTCACTTGTTAAAGCTAAAATTTATGAATGGAGTGATGGTGAAGATCAAGAAAGGGTTTTGCATCAAttaatcaaaaacatttcaatgGAAGAAAATGTTCAATTAATTTCAACTGAATTCAAGAAGCAGATTCCACCATTCAAGGCTCATGAGGCTTTACCTAAAGCTCTATCTATTAAGATATAA 825 0.3515 MASNIVVVFDFDKTIVECDSDNWVVDELGFTDLFNELFPTMPWNNLMDKMMMELHSHGKTIEDIVEVLKRIPINPRIIPSIKAAYALGCDLRVVSDANTFFIETILKHFGIRECFSEINTNPGYVDEEGRLRILPYHDLNKPPHKCNLCPPNMCKGLIINRIQDSLSPCEENKRFIYLGDGSGDYCPSLRLKEKDFVMPRKNFPVWDLICKDPSLVKAKIYEWSDGEDQERVLHQLIKNISMEENVQLISTEFKKQIPPFKAHEALPKALSIKI 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05390 274 SUPERFAMILY HAD-like 6 200 IPR036412 -
Tsu02g05390 274 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 201 IPR006384 GO:0016791
Tsu02g05390 274 Pfam Putative Phosphatase 5 237 IPR016965 GO:0016791
Tsu02g05390 274 PANTHER INORGANIC PYROPHOSPHATASE 3 272 - -
Tsu02g05390 274 PIRSF PLP_phosphatas_PHOSPHO2 1 241 IPR016965 GO:0016791
Tsu02g05390 274 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 189 - -
Tsu02g05390 274 Gene3D - 1 192 IPR023214 -
Tsu02g05390 274 PANTHER PHOSPHATASE, ORPHAN 1, 2 3 272 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05390 Tsu-Chr2 62447788 62450124 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05390 K13248 - gmx:100785878 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00449 08 4422576 4422872 Tsu02g05390 02 62447788 62450124 ECH
Tsu02g00295 02 2482474 2484727 Tsu02g05390 02 62447788 62450124 ECH
Tsu02g05390 02 62447788 62450124 Tsu02g05390 02 62447788 62450124 ECH
Tsu02g05390 02 62447788 62450124 Tsu08g00449 08 4422576 4422872 PCT
Tsu08g00450 08 4425724 4427193 Tsu02g05390 02 62447788 62450124 PCT