Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu08g00450 | ATGTCaaatattgttattgtttttgacTTTGACAAAACCATAATCGATTGTGACAGTGATGAATGGGTCACCGATCAGCTGGGTTTCACTGATTTCTTCAACGACTTCCTTCCCACCATGCCTTTGAACTCTCTCATGGAAATAATGATGATGGAGTTTCATTCACATGGTAAAACCATTGAAGACATTGAGAAAGTTCTTCATAGGATTCCTATTAACCAAAGAATAATATCTGCAATTAAATCAGCTCATGCTTTAGGGTGTGATTTAAGGATTGTGAGCGATTCCAATACATTTTTCATTGACACCTTTTTGAAGCATTTGGGAATAAGTGAATGCTTTTCAGAGATTAACACTAATCCTGGTTATGTTAATGAAGAAGGAAGATTAAGAATTTTGCCTTATCATGATTTCAATAAGGCTTCACATGGTTGCCCTCTCTGTCCTCCAAATATGTGCAAGGGTTTGATCATAGATAGAATCCAAAGTTGGATTTCTGAAAGGAATAATAATAAGCGGTTTATTTATCTTGGTGATGGTGCTGGAGATTATTGTCCTAGCTTGGGGCTTAAAGATAGAGATTTCATGATGCCAAGGAAGAATTTTCCAGCTTGGGACTTAATATGCAAAGACCCTTCACTTGTTAAGGCTGAAATTCATGGTTGGAGTGATGGAGAAGAGTTAGAACAagttttgatgaatttgattaaCAACATTATGATAGAGGAAAATGCTCAATTAATTTCTTCTAATTGCAAGCTGCAATCTCTATCAATTCCAGTGGCCATAGATTTTTAG | 798 | 0.3471 | MSNIVIVFDFDKTIIDCDSDEWVTDQLGFTDFFNDFLPTMPLNSLMEIMMMEFHSHGKTIEDIEKVLHRIPINQRIISAIKSAHALGCDLRIVSDSNTFFIDTFLKHLGISECFSEINTNPGYVNEEGRLRILPYHDFNKASHGCPLCPPNMCKGLIIDRIQSWISERNNNKRFIYLGDGAGDYCPSLGLKDRDFMMPRKNFPAWDLICKDPSLVKAEIHGWSDGEELEQVLMNLINNIMIEENAQLISSNCKLQSLSIPVAIDF | 265 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu08g00450 | 265 | PANTHER | PHOSPHATASE, ORPHAN 1, 2 | 1 | 259 | IPR016965 | GO:0016791 | |
| Tsu08g00450 | 265 | TIGRFAM | HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB | 5 | 186 | - | - | |
| Tsu08g00450 | 265 | PIRSF | PLP_phosphatas_PHOSPHO2 | 1 | 240 | IPR016965 | GO:0016791 | |
| Tsu08g00450 | 265 | PANTHER | INORGANIC PYROPHOSPHATASE | 1 | 259 | - | - | |
| Tsu08g00450 | 265 | TIGRFAM | DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | 3 | 200 | IPR006384 | GO:0016791 | |
| Tsu08g00450 | 265 | Pfam | Putative Phosphatase | 4 | 236 | IPR016965 | GO:0016791 | |
| Tsu08g00450 | 265 | SUPERFAMILY | HAD-like | 4 | 186 | IPR036412 | - | |
| Tsu08g00450 | 265 | Gene3D | - | 1 | 188 | IPR023214 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tsu08g00450 | Tsu-Chr8 | 4425724 | 4427193 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu08g00450 | K13248 | - | gmx:100785878 | 422.55 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Tsu08g00450 | 08 | 4425724 | 4427193 | Tsu02g05390 | 02 | 62447788 | 62450124 | PCT |