Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00449 ATGAATAATAATAAGAGGTTTATTTATCTTGGTGATGGTATTGGAGATTATTGTCCTAGTTTGAGGCTTAAAAAGAGAGATTTCATGATGCCAAGGAAGAATTTCCCAGCTTGGGATTTGATATGCAAAGACCCTTCACTTCTTAAGGATGAAATACATGGTTGGAGTGATGGAGAAGAGTTAGAACAAGTCTTGATGAAGTTGATTAACAACATTATGATAGAGGAAGATGCTCAATTAATTTCTTCTAATTGCAAGCTGCAATCTCTATCAATTCCAGTGGCCATAGATTTTTAG 297 0.3468 MNNNKRFIYLGDGIGDYCPSLRLKKRDFMMPRKNFPAWDLICKDPSLLKDEIHGWSDGEELEQVLMKLINNIMIEEDAQLISSNCKLQSLSIPVAIDF 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00449 98 Pfam Putative Phosphatase 3 69 IPR016965 GO:0016791
Tsu08g00449 98 PANTHER INORGANIC PYROPHOSPHATASE 2 92 - -
Tsu08g00449 98 PANTHER PHOSPHATASE, ORPHAN 1, 2 2 92 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00449 Tsu-Chr8 4422576 4422872 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00449 K13248 - gmx:100785878 154.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00449 08 4422576 4422872 Tsu02g05390 02 62447788 62450124 ECH
Tsu02g00295 02 2482474 2484727 Tsu08g00449 08 4422576 4422872 ECH
Tsu08g00449 08 4422576 4422872 Tsu08g00449 08 4422576 4422872 ECH
Tsu02g05390 02 62447788 62450124 Tsu08g00449 08 4422576 4422872 PCT