Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05127 ATGGCTTCTACTATCAAGGGTGATAGGAAGCTTGCACTTGATCTTGCATCATGGATGTTCAATGTAGTCACATCTGTAGGAATAATCCTTGTGAACAAAGCACTCATGGCTACACATGGTTTCACTTTTGCTACAACGTTAACTGGTCTGCATTTTGCCACAACAACGTTGTTGACATTGTTTCTTAAGTGGAACGGATATATCCAAGACACTCATCTTCCTTTGCCCGATCTTATCAAATATGTCATGTTTGCAAATTTCTCTATTGTGGGAATGAATGTTAGTTTAATGTGGAACTCTGTCGGTTTCTATCAGATTGCTAAGCTGAGTATGATTCCAGTATCTTGTTTCCTGGAAATTGTCTTGGACAATGTAAAATACTCAAGGGACACAAAGCTTAGCATTTCTTTGGTTCTCCTTGGAGTTGCTGTATGTACTGTCACCGATGTCAGTGTCAATGCTAAGGGTTTCATAGCTGCTGCAGTGGCAGTTTGGAGCACCGCACTGCAGCAATATTATGTGCATTTTCTTCAGAAAAAGTATTCTCTTGGATCTTTCAATTTGTTGGGCCATACAGCACCAATACAGGCATCAATTTTATTGCTAGTTGGTCCCTTTCTTGACTATTGGTTAACAAACAAACGAGTTGATGCCTACAACTACGGTTTAACATCCATCTTGTTCATTGTTTTGTCTTGCTCGATCGCGGTTGGAACAAACCTTAGCCAGTTCATTTGCATTGGAAGGTTCACAGCAGTATCATTCCAAGTCCTTGGCCATATGAAGACTATTCTTGTTCTTACATTAGGATTCATTTTATTTGGAAAAGAGGGTCTCAATCTACAAGTAATAGTAGGCATGATCATCGCTATAATGGGAATGATTTGGTACGGTAATGCATCTTCTAAGCCAGGAGGGAAAGAGTCTCGTAGTAGCTTGTCGATTCCTATTCCTACCACCAAAACACAGGAGTATAATTTACTACCAGTTGCATCTGCTGAAACTGATCATAGCGACGAGGAAGTGTAA 1029 0.4004 MASTIKGDRKLALDLASWMFNVVTSVGIILVNKALMATHGFTFATTLTGLHFATTTLLTLFLKWNGYIQDTHLPLPDLIKYVMFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEIVLDNVKYSRDTKLSISLVLLGVAVCTVTDVSVNAKGFIAAAVAVWSTALQQYYVHFLQKKYSLGSFNLLGHTAPIQASILLLVGPFLDYWLTNKRVDAYNYGLTSILFIVLSCSIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLTLGFILFGKEGLNLQVIVGMIIAIMGMIWYGNASSKPGGKESRSSLSIPIPTTKTQEYNLLPVASAETDHSDEEV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05127 342 PANTHER SOLUTE CARRIER FAMILY 35 16 301 - -
Trre7g05127 342 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05127 Trre-Chr7 57931712 57934054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05127 9 334 Organic Solute Cotransporters AT1G77610 25.568 2.37e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05127 K26224 - gmx:100814890 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05127 7 57931712 57934054 Trre7g05127 7 57931712 57934054 ECH
Trre7g05127 7 57931712 57934054 Trre5g04215 5 43898264 43901999 ECH
Trre7g05127 7 57931712 57934054 Trre5g04171 5 43336112 43339294 PCT