Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04171 ATGGGTGAAGGTGGTTTTCAGCTTGGGACTGTGGGTGCTTTGACACTTTCTGTTGTGTCTTCTGTCTCCATTGTTATTTGCAATAAGGCACTCATGAGTTCACTGCATTTCATTTTTGCCACAACTTTGACAAGCTGGCATCTACTTGTCACATTTTGTTCCCTTCATTTGGCACTCAAAATGAGATTCTTTGAGCACAAACCTTTTGAGCAGAAAGCCGTAGTTGGATTTGGGATTTTAAATGGAATCTCAATTGGACTTTTAAATTTAAGCCTCGGGTTCAATTCTGTCGGCTTCTATCAAATGACCAAGCTTGCAATCATTCCTTGTACTGTGCTGTTGGAGACCCTTTTTCTCGGAAAGAAATTCAGTAAAAGAATTCAATTTTCTCTATCTATCCTCCTTATGGGTGTCGGGATTGCAACAGTCACAGATTTACAGTTGAATGCTCTGGGATCTTTCTTATCTCTTCTGGCGGTGATTACAACATGTGTTGCTCAGATTATGACAAACACTATCCAGAAGAAGTATAAGGTTTCTTCCACCCAGCTCCTATATCAATCATGTCCATATCAAGCAGCAACCCTGTTAATCACTGGTCCGTATCTGGATAAACTTTTGACCGATCAAAATGTTTTTGGTTTCAAGTACACAACACAAGTGACGGTTTTCATAGTTCTTTCCTGCCTCATCTCAATTTCTGTCAATTTTAGCACATTTCTTGTAATTGGAAAGACATCTCCAGTCACCTATCAGGTTCTTGGACACCTGAAAACATGCCTTGTATTGGCATTTGGTTATACTTTGCTCCAGGACCCATTCAGCTGGAGAAACATAATGGGTATTTTGTTGGCAATGGTTGGAATGATTCTGTATTCTTACTATTGCACTCTTGAGAATCAGCAAAAAGCTATTGAAGCTGCGGCACAAGCATCCCAGGCAAGAGAAGGTGAATCTGATCCTCTCATTAATTTGGAAAAAGGAAGTGGTACTGTGACTGACAGTGTTGGACACATGTCCCCTGTATGGAGCAAAGACAAAGACTAA 1047 0.404 MGEGGFQLGTVGALTLSVVSSVSIVICNKALMSSLHFIFATTLTSWHLLVTFCSLHLALKMRFFEHKPFEQKAVVGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFLGKKFSKRIQFSLSILLMGVGIATVTDLQLNALGSFLSLLAVITTCVAQIMTNTIQKKYKVSSTQLLYQSCPYQAATLLITGPYLDKLLTDQNVFGFKYTTQVTVFIVLSCLISISVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYTLLQDPFSWRNIMGILLAMVGMILYSYYCTLENQQKAIEAAAQASQAREGESDPLINLEKGSGTVTDSVGHMSPVWSKDKD 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04171 348 Pfam Triose-phosphate Transporter family 19 293 IPR004853 -
Trre5g04171 348 PANTHER SOLUTE CARRIER FAMILY 35 11 296 - -
Trre5g04171 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 218 293 - -
Trre5g04171 348 MobiDBLite consensus disorder prediction 316 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04171 Trre-Chr5 43336112 43339294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04171 21 332 Organic Solute Cotransporters AT1G77610 25.697 5.04e-24 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04171 K15285 - gmx:100786018 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05127 7 57931712 57934054 Trre5g04171 5 43336112 43339294 PCT