Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04215 ATGTCATCTGCAAGCAAGGGTGATAGGAAGGCTTCCCTTGATGCAGCATCATGGTTGTTTAACGTTGTTACGTCTGTGGCAATAATCCTTGTGAATAAAGCCCTGATGGCCACATATGGTTTTAGTTTTGCCACAACTTTAACTGGAATGCATTTTGCCACAACAACCTTGTTGACGGTCATTCTTAAATCGCTGGGATATATCCAGACCTCTCATCTTCCAAAATCTGATATCATCAAATTTGTCTTGTTTGCAAATTGTTCCATTGTTGGCATGAATGTGAGCTTAATGTGGAACTCTGTTGGTTTTTATCAGATTGCTAAGCTGACTATGATTCCAGTATCTTGCCTCCTGGAAGTTGTCTTGGACAATGTGCGATATTCAAGGGACACAAAGCTTAGTATCATCTTGGTTTTGGCTGGTGTTGCAGTATGTACAGTCACTGATGTCAGTGTCAATGCAAAGGGTTTCATAGCTGCTGTGATAGCAGTTTGTAGCACAGCACTGCAGCAGTATTATGTACATTATCTTCAGAGGAAATATTCTATTGGATCATTTAACTTGTTGGGCCACACTGCACCAGCACAGGCAGCAAGTTTACTTCTAGTAGGCCCCTTTATGGACTATTGGTTGACAAACAAACGGGTTGATGCATATGACTATGGTTTGACATCCGTTTTGTTCATCATTCTGTCTTGCACCATTGCAGTAGGGACAAATCTCAGCCAGTTCATCTGCATTGGTAGGTTTACGGCTGTATCATTCCAAGTCCTTGGCCATATGAAGACTATTCTGGTCTTATTCATGGGATTCATTTTCTTTGGAAAAGAGGGCCTCAATCTACATGTTGTTCTCGGCATGACAATTGCAATAGCCGGAATGATTTGGTACGGCAATGCTTCTTCTAAGCCAGGGGGAAAAGAGCGTCGTAGCTTTTCCCTTCCTACCACTAAGACACAAGATTATTCTGCACTACCTGTGTCCTCTGAATCGGTTGAGAAGGTATAA 1008 0.4206 MSSASKGDRKASLDAASWLFNVVTSVAIILVNKALMATYGFSFATTLTGMHFATTTLLTVILKSLGYIQTSHLPKSDIIKFVLFANCSIVGMNVSLMWNSVGFYQIAKLTMIPVSCLLEVVLDNVRYSRDTKLSIILVLAGVAVCTVTDVSVNAKGFIAAVIAVCSTALQQYYVHYLQRKYSIGSFNLLGHTAPAQAASLLLVGPFMDYWLTNKRVDAYDYGLTSVLFIILSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLFMGFIFFGKEGLNLHVVLGMTIAIAGMIWYGNASSKPGGKERRSFSLPTTKTQDYSALPVSSESVEKV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04215 335 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
Trre5g04215 335 MobiDBLite consensus disorder prediction 302 335 - -
Trre5g04215 335 MobiDBLite consensus disorder prediction 312 327 - -
Trre5g04215 335 PANTHER SOLUTE CARRIER FAMILY 35 17 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04215 Trre-Chr5 43898264 43901999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04215 18 333 Organic Solute Cotransporters AT1G21870 22.018 2.27e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04215 K26224 - gmx:100794276 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04215 5 43898264 43901999 Trre5g04215 5 43898264 43901999 ECH
Trre7g05127 7 57931712 57934054 Trre5g04215 5 43898264 43901999 ECH