Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01490 ATGGCTGAATCAGAACCGAAAATATTTATACCAGAGAGTTTTCAAGTAAACTATGATGTTTCAAGTCAAATTAAGATGATTTGGGAAGTGATGAAAGCACCATTGATTGTTCCTCTTTTGAATGCTTGTGTTTACATTTCATTAGCAATGGCACTTATGCTTTTCATGGAAAGAGTTTATATGGGTATTGTTATTGTTTTAATTAAACTCTTTTGGAAAAAACCTGAACAACGTTATAACTATGAACCTCTTCAAGATGATGAAGAACTTGGTGGTTCTAATTTTCCTGTTGTTCTTGTTCAAATTCCAATGTTCAATGAAAGAGAGGTTTATAAAGTTTCGATTGGGGCTGCTTGCGGACTTTCATGGCCTACCGATCGACTCGTGATCCAAGTACTTGATGATTCTACTGACCCTGTGGTTAAGCAAATGGTGGAAATGGAATGCCAAAGATGGGCAAGTAAAGGAATAAATATAACATACCAAATTAGAGAAAATAGAGGTGGATACAAAGCAGGAGCATTAAAAGAAGGATTAAAACGTAGCTATGTGAAGCATTGTGAATATGTTGTTATTTTCGATGCTGATTTTAGTCCTCCACCTGGTTTTCTTAGAAGAGCTATTCCTTTTCTTGTTGGAAATCCTGAACTTGCTCTTGTTCAAGGTCGTTGGAGATTTGTGAATTCAAATGAATGTTTGTTGACAAGAATGCAAGAGATGTCTTTGGATTATCATTTCACAGTTGAGCAAGAAGTTGGATCAGCTACTCATGCTTTCTTTGGTTTCAATGGAACTGCTGGTATTTGGAGAATAGCTGCAATCAATGAAGCAGGAGGGTGGAAAGACAGAACAACAGTCGAAGATATGGACCTCGCTGTTCGAGCAAGTCTTAGGGGATGGAAATTTTTGTACCTCGGAGACCTCCAGGCAAATAGTGAACTTCCAAGTACTTTGAGAGCCTTCAGATTCCAGCAGCACAGATGGTCTTGTGGTCCTGCTAATCTGTTCCGCAAAATGGCGATGGAGATTATAAGGAACAAGAAAGTGAAGTTCTGGAAGAAAGTGTATGTTATATACAGCTTTTTCTTCGTTCGCAAAATCATAGCTCACATGGTCACTTTCTTCTTCTACTGTCTTGTAATCCCGCTCACAATTTTGGTCCCGGAGGTTCATGTTCCAATTTGGGGTGCCGTTTATATTCCTTCTATCATCACCATTCTCAACTCAGTCGGAACACCAAGGTCTATTCATCTTCTGTTCTATTGGATCCTTTTCGAGAATGTCATGTCTTTACACCGTACCAAGGCGACCCTTATCGGTTTGCTCGAATATGGAAGGGCTAATGAATGGGTTGTAACTGAAAAACTTGGAGATTCAGTCAACAACAACATTAAAAACAAATCTGCAGATGCTGCCAAGAAGACTAATGTCAAGGTTCAAAAGAAATCAACAAGATCCAAATTTATGGAAAGGCTTAACTTTTTGGAGCTAGGATTTGCAGTGTTTCTCTTCTTCTGTGGATGCTATGATTATAATTATGGGAAACACAACTACTTTATTTACCTATTCCTTCAAACCTTAACCTTCTCAATTGTTGGATTTGGTTATGTTGGAACCATAGTGTAA 1626 0.3819 MAESEPKIFIPESFQVNYDVSSQIKMIWEVMKAPLIVPLLNACVYISLAMALMLFMERVYMGIVIVLIKLFWKKPEQRYNYEPLQDDEELGGSNFPVVLVQIPMFNEREVYKVSIGAACGLSWPTDRLVIQVLDDSTDPVVKQMVEMECQRWASKGINITYQIRENRGGYKAGALKEGLKRSYVKHCEYVVIFDADFSPPPGFLRRAIPFLVGNPELALVQGRWRFVNSNECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGIWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQANSELPSTLRAFRFQQHRWSCGPANLFRKMAMEIIRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFFFYCLVIPLTILVPEVHVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATLIGLLEYGRANEWVVTEKLGDSVNNNIKNKSADAAKKTNVKVQKKSTRSKFMERLNFLELGFAVFLFFCGCYDYNYGKHNYFIYLFLQTLTFSIVGFGYVGTIV 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01490 541 Pfam Glycosyl transferase family group 2 189 381 IPR001173 -
Trre7g01490 541 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 87 315 IPR029044 -
Trre7g01490 541 CDD CESA_CaSu_A2 96 332 - -
Trre7g01490 541 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 21 539 - -
Trre7g01490 541 FunFam Glucomannan 4-beta-mannosyltransferase 9 87 315 - -
Trre7g01490 541 SUPERFAMILY Nucleotide-diphospho-sugar transferases 93 376 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01490 Trre-Chr7 11042735 11048549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01490 1 541 Miscellaneous Gene Families AT5G22740 78.967 0.0 888
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01490 K13680 - gmx:100791645 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01490 7 11042735 11048549 Trre7g01490 7 11042735 11048549 ECH
Trre13g04408 13 51653845 51660179 Trre7g01490 7 11042735 11048549 ECH
Trre1g02450 1 19819790 19827729 Trre7g01490 7 11042735 11048549 ECH