Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00243 ATGAACTATGCATATCAAATGGGGTCTGGTAGTACTGCTAGAAGAACTTTGGAGTTTGGTAAGACACATGTAGTGAGGCCTAAAGGAAAACATCAAGCCACTATAGTTTGGCTGCATGGCCTTGGTGATAATGGTTTGAGCTCATTTCAGCTCCTTGAATCACTTCCACTTCCAAATATAAAATGGATTTGTCCAACTGCTCCTATCCGCTCTGTAGCTATACTTGGTGGTTTTTCTTGCACTGCATATTACTGCAGCAGAGGTGGCTGCAGAAAAATCGGCTGCCGAGGATCCAAATCGGAAGACTGTCCAGTTGATTGGGAGGGTTTAGATGCCACATCGGCACATATTTCTAATTTGTTGTCAGCTGAGCCATCTCATGTGAAAGTTGGGATTGGAGGCTTTAGTATGGGTGCTGCAACAGCTCTATACTCAGCAACTTGTTTTGCCATGGGAAGGTATGGAAATGGCATCCCCTACCTTACCAACTTAAGAGCAGTTATTGGATTAAGTGGTTGGCTTCCCGGATCAAGGAGCTTAACAAGCAGGATAGAAATGTCAGATGAAGCAAGAAGGAGAGCTGCTTCATTACCAGTTTTTCTGAGCCATGGAATTAGTGATGATGTAGTTCCTTACAAATATGGAGAGAAATCAGCCCAATTTTTGAGTTCAGCAGGGTTTCAATATATAACATTCAAATCCTATGATGGATTTGGTCATTATACAGTTCCTAGAGAGATGGATGAGGTTTCCAATTGGCTTGGTTCAAGGTTGGGGCTTGAGGGACCCTTATAA 795 0.4289 MNYAYQMGSGSTARRTLEFGKTHVVRPKGKHQATIVWLHGLGDNGLSSFQLLESLPLPNIKWICPTAPIRSVAILGGFSCTAYYCSRGGCRKIGCRGSKSEDCPVDWEGLDATSAHISNLLSAEPSHVKVGIGGFSMGAATALYSATCFAMGRYGNGIPYLTNLRAVIGLSGWLPGSRSLTSRIEMSDEARRRAASLPVFLSHGISDDVVPYKYGEKSAQFLSSAGFQYITFKSYDGFGHYTVPREMDEVSNWLGSRLGLEGPL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00243 264 Gene3D alpha/beta hydrolase 12 259 IPR029058 -
Trre7g00243 264 SUPERFAMILY alpha/beta-Hydrolases 23 258 IPR029058 -
Trre7g00243 264 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 262 - -
Trre7g00243 264 Pfam Phospholipase/Carboxylesterase 22 254 IPR003140 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00243 Trre-Chr7 1638578 1643170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00243 5 262 Acyl Lipid Metabolism Gene Families AT3G15650 68.217 1.71e-115 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00243 K06130 - gmx:100782153 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00243 7 1638578 1643170 Trre11g04824 11 59385027 59387340 ECH
Trre11g02428 11 28883318 28887932 Trre7g00243 7 1638578 1643170 ECH
Trre7g00243 7 1638578 1643170 Trre7g00243 7 1638578 1643170 ECH
Trre11g04824 11 59385027 59387340 Trre7g00243 7 1638578 1643170 PCT