Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02428 ATGAGCTCTGTTGGTGGTAGATCTGCTGGAAGAGCATTTGAGTTTGGAAGAACCTATGTAGTCAAGCCAAAAGGTAAACACCAAGCAACGATAGTTTGGTTGCATGGTCTCGGGGATAACGGCTCCAGTTGGTCGCAGCTATTAGAGACCATTCCTCTTCCAAATATTAAATGGATATGTCCAACTGCTCCCACACGACCAATGTCTATATTTGGTGGCTTTCCTTCTACTGCTTGGTTTGATGTTGAAGAGCTTTCTGAAGCAGCTCCCGATGATCTAGAAGGTTTGGATGCTTCAGCTGCACATGTTGCCAATTTGTTGTCTACAGAACCTGCAGACATTAAGCTTGGTGTTGGAGGGTTTAGCATGGGAGCAGCTACAGCCCTTTACTCAGCATCCTGCTTTACTGCTGGGAAATATGGGAATGGCAATGCTTATCCAGCCAACATAAGTGCAGCTGTTGGATTAAGTGGCTGGCTTCCATGTTCAAAGACCTTGAGTAACAAGTTACAAGGGATAGATGAAGCCACGAGGCGTGCTCAGTCCTTTCCCATTTTGATGTGTCATGGAAAAGGTGATGATGTAGTTCCATTTAAGTTTGGTGAGAAATCATCCAAGTGCTTAAATGCTAATGGATTTCAGGATGTAACTTTTAAAGCCTATAATGGGCTTGGCCACTACACAATTCCAGAAGAGACAGATGATGTTTGTGCTTGGCTAACATCAAAATTGGGACTTGAAGGCAATGCTGCCTAG 756 0.4418 MSSVGGRSAGRAFEFGRTYVVKPKGKHQATIVWLHGLGDNGSSWSQLLETIPLPNIKWICPTAPTRPMSIFGGFPSTAWFDVEELSEAAPDDLEGLDASAAHVANLLSTEPADIKLGVGGFSMGAATALYSASCFTAGKYGNGNAYPANISAAVGLSGWLPCSKTLSNKLQGIDEATRRAQSFPILMCHGKGDDVVPFKFGEKSSKCLNANGFQDVTFKAYNGLGHYTIPEETDDVCAWLTSKLGLEGNAA 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02428 251 Gene3D alpha/beta hydrolase 11 245 IPR029058 -
Trre11g02428 251 SUPERFAMILY alpha/beta-Hydrolases 17 244 IPR029058 -
Trre11g02428 251 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 3 249 - -
Trre11g02428 251 Pfam Phospholipase/Carboxylesterase 19 240 IPR003140 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02428 Trre-Chr11 28883318 28887932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02428 6 248 Acyl Lipid Metabolism Gene Families AT5G20060 74.074 1.17e-139 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02428 K06130 - gmx:100791683 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g02428 11 28883318 28887932 Trre7g00243 7 1638578 1643170 ECH
Trre11g02428 11 28883318 28887932 Trre11g04824 11 59385027 59387340 ECH
Trre11g02428 11 28883318 28887932 Trre11g02428 11 28883318 28887932 ECH