Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04824 ATGAGTCATACACATTCTCATACCGGTTCTGGTAGTAGAACTAATCGACGAGCTTTCGAGTTTGGAAAGACACATGTAGTTAGGCCTAAAGGAAAACACCAAGCTACTATAGTTTGGCTACATGGACTTGGTGATAATGGTTTGAGCTCATCTCAGTTGCTGGAATCACTTCCACTTCCAAATATAAAATGGATTTGCCCTACTGCTCCTACCCGTCCCGTGGCAATACTTGGTGGTTTTCCTTGCACTGCATGGTTTGATGTGGGAGAACTTTCAGAAGATGGTCCAGATGATTGGGAAGGTTTAGATGCATCAGCATCCCATATTGCTAATTTGTTGTCAACAGAGCCAGCTGATGTGAAAGTTGGTATTGGAGGGTTTAGCATGGGTGCAGCAATAGCATTATACTCTGCAACATGCTATGCCATGGGAAGGTATAGTAATGGCATTCCATACCCTGTCAGTTTAAGAGCAATTGTTGGACTCAGTGGTTGGCTTCCAGGATCAAGGAGCTTAGGAAACAAGATAGAAGTCTCACATGAAGCACGAAGGCGAGCTGCTTCGTTACCGATTTTACAGTGTCACGGAATCAGTGATGATGTAGTACACTGCAAGTATGGAGAGAAATCTGCACAATCCTTAAGCTCAGCAGGGTTTCGATATGTTGCATTCAAATCCTATGAAGGGCTTGGTCATTACACAGTTCCAAGAGAGATGGGTGAAGTTTCGACCTGGCTTAGTTCAAGGTTGGGGCTTGAAGGATTTTCGGCGTAA 774 0.4419 MSHTHSHTGSGSRTNRRAFEFGKTHVVRPKGKHQATIVWLHGLGDNGLSSSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSEDGPDDWEGLDASASHIANLLSTEPADVKVGIGGFSMGAAIALYSATCYAMGRYSNGIPYPVSLRAIVGLSGWLPGSRSLGNKIEVSHEARRRAASLPILQCHGISDDVVHCKYGEKSAQSLSSAGFRYVAFKSYEGLGHYTVPREMGEVSTWLSSRLGLEGFSA 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04824 257 SUPERFAMILY alpha/beta-Hydrolases 25 250 IPR029058 -
Trre11g04824 257 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 254 - -
Trre11g04824 257 MobiDBLite consensus disorder prediction 1 20 - -
Trre11g04824 257 Gene3D alpha/beta hydrolase 14 251 IPR029058 -
Trre11g04824 257 MobiDBLite consensus disorder prediction 1 17 - -
Trre11g04824 257 Pfam Phospholipase/Carboxylesterase 24 247 IPR003140 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04824 Trre-Chr11 59385027 59387340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04824 1 254 Acyl Lipid Metabolism Gene Families AT5G20060 66.142 1.93e-127 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04824 K06130 - gmx:100798395 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00243 7 1638578 1643170 Trre11g04824 11 59385027 59387340 ECH
Trre11g02428 11 28883318 28887932 Trre11g04824 11 59385027 59387340 ECH
Trre11g04824 11 59385027 59387340 Trre11g04824 11 59385027 59387340 ECH
Trre11g04824 11 59385027 59387340 Trre7g00243 7 1638578 1643170 PCT