Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02095 ATGCCAACGCCAGTAACAGCGGCGAGGCAATGCTTAACACCGGAAGCCGGAAAAGCACTAGACGAAGCAGTAACCGTCGCAAAACGCCGTGGACATGCTCAAACGACATCACTTCACGCCGTTTCAGCTTTGTTATCACTTCCATCATCGTCGATTCTACGAGACGCATGTTGTCGTTCGAGAAACTCAGCATATTCGCCACGGTTACAGTTCAAAGCACTCGATCTTTGTTTATCGGTATCATTAGATAGAGCACCTTCATCGCATAACAACGTTTCCTCCGATCAAGAACCACCGGTTTCGAATTCGTTTATGGCTGCGATAAAAAGGTCTCAGGCGAATCAACGCCGTCATCCTGATAATTTTCATTTTTATCATCAACAACAACAGCAATTGCAGAATCAGCAAACGTTTTCCGTTTCCGCCGTTAAAGTTGAGTTACAGCATTTGGTTTTGTCTATTCTTGATGATCCGGTTGTTAGTCGGGTTTTCGCTGAAGCGGGTTTTCGGAGCTCCGAAATTAAAATCGCTATTCTTCGACCTCTTCCGAATCTCTTTCGTTCACGTGGCCCGCCTGTTTTTCTGTGCAACCTGCCGGAGCAGCCACGCCGGGGGTTTGGGATTGGATTAGGATTAGGTTTAGGGTTTCCGTTTTTACACGGATTTGGCGATGAGGATGAAATTGACAATTTCCGGCGAATTGGGGAGATTTTTGTTCGCAGCAAAGGAAAAAATCCTCTGCTTCTCGGTGCATGTGCTAATGATGCTCTGAGAAATTTTACCGACGCGGTGGAGAAACGGAGAGAGGGGGTTTTACCTTTGGAGCTAGTGGGGTTGCGTGTGTTTTGTATTGGGAAGGAATTGATGAGTGGTGACAGTGAGGTGGTAGGTTTGAGGTTGAAGCAAATTGCTGTGATAGCAGAGGAGTGTGTTGGACCTGGTGTTGTAGTGAGTTTTGGTGAGTTGAATGGTTTTGTAAATGATGATGATGGTGGTGGTGGGTTTGGGGAAGGTGTTGTTAGGGAATTGGGGAAATTGTTGAATATTCATTATGATAAGTTTTGGTTGGTGGGTTCTTCTGCTAGTTATGAGAGTTACTTGAAATTTCTTGGTAGGTTTCCTTCTGTAGAGAAAGATTGGGATTTGCAGATTCTTCCTATAACTTCTGTTAAGCCTGCTGAATCATATCAGAAGCCTAGGTCCAGCTTAATGGATTCATTTGTACCACTTGGTGGTTTTTTTCCATCACAATCTGATTTGAAAGATCAACTAAATGGTTCATTTTCTTGTGTTCCTCGCTGTCATCAATTTGGTGAAAAGTGTGAGCATGAAGTCCTTGCTGCTTCAAAGGAAAGATTTTCACTTTCATCTCCTGATCTATACACATCCAACTTACCTCAATGGTTAAAGACTACAGAATTCGGCACAGCAAAAGCATTGAATGTTAAGACCAATGATGATGGTGTTTTGGTGGATAGTAGTGAATCTTGTACGCCTCATACTAACTTGGACAACATTTGCCAAGTTCTCCATCAGCGTATCCCTGAGGCAAATACTTGTCCAACTGTTGTGGGGTTTCATTGTACTGCTGACAACAAAAACGAAGAGGCTGACAACCGCGTCGGCAAAATCATAGACAAATCACCTAGAGAATACATCAATCTCAACTCTCATGTACAAACAATGTCAACCTTACAATCCGGAAGTCCCTTTCCTGCTATCTTCATGGCAAAGCAGGAGAAAAATAGTCCTAAACTAACTGATATGTTCCAGAAAGTAAAAGATCTTGAGTCAGGTGACCGAAGATCATGCAACATGTCCAGTTCAAGTGTGAGCGATAGTTGTCAACTGTCTCCAACATCTGTGATTTCGGTAACTACAGATCTAGGCTTAGGAATATGCTCCTCTCCTACCAGCAGTAAATTGAAGAAACCTGCATTTCAATATACAATGGAACCTCCAAAGCAAATTCCTAATCAATTTTCTTCAAGCTTTAATTTGGACGAAGAGAAGCTTCCATCCCAATCCTCATCCTGCTTAACTTTTGACTATTGTCGACAAGTTGATGCAAGAAATCCTAAAATTCTTTTCGAAGTTCTTTCCAAAGAGGTAAGCTGGCAAGCTGAAGCTATAAGGGCTATTGTCAAAACAATAGTCTGTGGCCCAACAAAAAGGCCTGAAGACCATGGAGCAAACCAGCGGGGGGACAAATGGATGAATTTTGTTGGACCTGATAGGCATGGTAAAAAGAAAATTGCTATTTCTCTAGCTGAGTTACTGTATGGAAGCCGGGAAAACTTTACTTTTGTGGATCTAAGTTCCGAAGAAATGAAAGGATGCAATGTGAAATTCAGAGGGAAGACTAATCTTGATTTTATTGTCGATGAGTGCTGCAAGAAACCATTGTCTGTTGTTTTCATTGAAAATGTTGATAAAGCAGATATAGTAGCTCAAAGTAGTTTGTCTCATGCCATCAAGACAGGAAAAATCACAGACTCGAAAGGACGAGAAATTAGTGTAAACAATGCTATATTTGTATTCTCCTTCTCAGATCAAAATTGTTTGATTCAAACAACGGAACCTTCCAACTATTCCGAGGAAAGAATACTGAGGGCAAAGAACGGAGGTATCAAGATAAAAGTTGAACATATGGTTAGAGACATCAGAAGCCAAAGCATCAGTGTAGCTAACAATTCAATAAATGTCATTCCCAATCTAAATTTCATAAACAAACGAAAATTGATTAGTGACAATGAACTTCACGATCCCCATTTACTCTCAGATACGGCTAAAAGGGCACATACAACATCAAATTGGCTTTTAGATTTGAATCTTCCAGCCGAAGAGAATGAACAGAAACAAACAGATGAGGGAGACATTGAACATGTCTCAACTGAGAACCAAAACCTCTGGTTGCAAGATTTGTATAATCAGGTTGATGAAACAGTAATTTTTAAACCATGTGATTTTGATGCACTCGGAGATAGAGTGTTGAAATTGGTGAGAAGTAACTTCAACAAAATTCTTGGATCCGAGTGTGCCTTACAAATCCAAAGAGAAGTTACGGACCAATTGCTTGCAGCCGCATATGTATCGGATAGGGATATGGAGGTGGAGAACTGGATTGAGCAAGTTCTCTGCGGTGGATTCACTGAAGTGCAGAGAAGATTCAACCTCACTGCTAGTTCTATTGTGAAACTAACCACATGTCCAGAGCAAGAATCAGGTGTACACCTTCCACCAAGGATAGTTTTAGACTGA 3261 0.4143 MPTPVTAARQCLTPEAGKALDEAVTVAKRRGHAQTTSLHAVSALLSLPSSSILRDACCRSRNSAYSPRLQFKALDLCLSVSLDRAPSSHNNVSSDQEPPVSNSFMAAIKRSQANQRRHPDNFHFYHQQQQQLQNQQTFSVSAVKVELQHLVLSILDDPVVSRVFAEAGFRSSEIKIAILRPLPNLFRSRGPPVFLCNLPEQPRRGFGIGLGLGLGFPFLHGFGDEDEIDNFRRIGEIFVRSKGKNPLLLGACANDALRNFTDAVEKRREGVLPLELVGLRVFCIGKELMSGDSEVVGLRLKQIAVIAEECVGPGVVVSFGELNGFVNDDDGGGGFGEGVVRELGKLLNIHYDKFWLVGSSASYESYLKFLGRFPSVEKDWDLQILPITSVKPAESYQKPRSSLMDSFVPLGGFFPSQSDLKDQLNGSFSCVPRCHQFGEKCEHEVLAASKERFSLSSPDLYTSNLPQWLKTTEFGTAKALNVKTNDDGVLVDSSESCTPHTNLDNICQVLHQRIPEANTCPTVVGFHCTADNKNEEADNRVGKIIDKSPREYINLNSHVQTMSTLQSGSPFPAIFMAKQEKNSPKLTDMFQKVKDLESGDRRSCNMSSSSVSDSCQLSPTSVISVTTDLGLGICSSPTSSKLKKPAFQYTMEPPKQIPNQFSSSFNLDEEKLPSQSSSCLTFDYCRQVDARNPKILFEVLSKEVSWQAEAIRAIVKTIVCGPTKRPEDHGANQRGDKWMNFVGPDRHGKKKIAISLAELLYGSRENFTFVDLSSEEMKGCNVKFRGKTNLDFIVDECCKKPLSVVFIENVDKADIVAQSSLSHAIKTGKITDSKGREISVNNAIFVFSFSDQNCLIQTTEPSNYSEERILRAKNGGIKIKVEHMVRDIRSQSISVANNSINVIPNLNFINKRKLISDNELHDPHLLSDTAKRAHTTSNWLLDLNLPAEENEQKQTDEGDIEHVSTENQNLWLQDLYNQVDETVIFKPCDFDALGDRVLKLVRSNFNKILGSECALQIQREVTDQLLAAAYVSDRDMEVENWIEQVLCGGFTEVQRRFNLTASSIVKLTTCPEQESGVHLPPRIVLD 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02095 1086 Gene3D - 675 901 IPR027417 -
Trre5g02095 1086 Gene3D - 10 180 IPR036628 -
Trre5g02095 1086 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 693 853 IPR027417 -
Trre5g02095 1086 ProSiteProfiles Clp repeat (R) domain profile. 8 184 IPR004176 -
Trre5g02095 1086 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1063 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02095 Trre-Chr5 15612301 15616757 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02095 - - tpra:123894785 1950.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02095 5 15612301 15616757 Trre5g02095 5 15612301 15616757 ECH
Trre5g00947 5 6528415 6533972 Trre5g02095 5 15612301 15616757 ECH
Trre9g03726 9 45651007 45655702 Trre5g02095 5 15612301 15616757 ECH
Trre5g02095 5 15612301 15616757 Trre5g00947 5 6528415 6533972 ECH
Trre5g02095 5 15612301 15616757 Trre9g03726 9 45651007 45655702 ECH