Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05324 ATGGAGACTGAAACCTTCGTCGATAAGGTCGAAGAGAAGTTTCACGACAACAACTCCGATTCAGATTCATACTCCGATTCCGATGATGATCACAATAACAACATCCACTCCAAGAGGCCACCACTACCCGCCTCTAAAGCTAACTCTGTTTACCGTCTCTTTGGTCGCGATCGCCCCGTTCATATGGTCTTAGGCGGTGGAAAACCTGCGGATATTTTACTATGGAGGAACAAGAAATTAACGGGAATGGCACTTGGTGCTGGCACTGCTTTGTGGGTTTTCTTTGAGTTGATGGAATACCACCTCATAACTCTTATTTGCCATTTAATGATTTTGTCTCTTGGTGCCCTTTTCTTGTGGTCTAATGCATCTGTCTTTATCCACAAGTCTCCGATGCAAATCCCAAATGTTTCGATTCCTCAGGAATGCATTATTGAGGCTGTTACCGTTCTGAGAATTGAGATTAACCAAGTCTTCACTGTTTTGCGGGAAATTGGAACTGGGAGAGATATTAAGAAGTTCCTTACCGTTGTCGCCGGATTGTGGGTTATCTCAGTTATTGGGAGCTGGTTCAATTTCTTGACATTGTTTTATCTATTCTATCTATCACTGTTTACACTGCCACTGGTGTATGAGAAAAACGAAGACCAGGTTGATGCACTAGCTGAGAAAGCAATGATCGAGATCAAGAAACAGTATGCAGTGCTTGATGCTAAGGTTTTGAGCCAGATACCGATCGCAGGGTTTAAAAAAGATTAG 759 0.4282 METETFVDKVEEKFHDNNSDSDSYSDSDDDHNNNIHSKRPPLPASKANSVYRLFGRDRPVHMVLGGGKPADILLWRNKKLTGMALGAGTALWVFFELMEYHLITLICHLMILSLGALFLWSNASVFIHKSPMQIPNVSIPQECIIEAVTVLRIEINQVFTVLREIGTGRDIKKFLTVVAGLWVISVIGSWFNFLTLFYLFYLSLFTLPLVYEKNEDQVDALAEKAMIEIKKQYAVLDAKVLSQIPIAGFKKD 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05324 252 Pfam Reticulon 70 225 IPR003388 -
Trre1g05324 252 MobiDBLite consensus disorder prediction 1 36 - -
Trre1g05324 252 MobiDBLite consensus disorder prediction 1 44 - -
Trre1g05324 252 ProSiteProfiles Reticulon domain profile. 69 252 IPR003388 -
Trre1g05324 252 PANTHER RETICULON 45 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05324 Trre-Chr1 59118191 59120419 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05324 - K20721 gmx:100790190 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01096 15 8508030 8510027 Trre1g05324 1 59118191 59120419 ECH
Trre7g05508 7 60834001 60835956 Trre1g05324 1 59118191 59120419 ECH
Trre1g05324 1 59118191 59120419 Trre1g05324 1 59118191 59120419 ECH