Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01096 ATGGCTGACGTATCGGAAAGCACGGTGACCGCGGTGAGTCGTGACGGCGATTCGTTGCTTGAAAAGATCACTGAGAAACTTCACTTTGATGATTCCTCCTCTGATTCATCGGATTCGCATTCTGAAGCTGATAAACCAGTTGTTGAGTCCGTTAAGGAGAAGGTTTTTCGTCTTTTTGGAAGGGAGAAGCCTGTTCATTCTGTCCTCGGTGGAGGAAAGCCTGCTGATGTGTTCTTATGGAAAAACAAGAAGATATCTGCTGGTACACTTGGTGTAGCAACTGCAATTTGGGTGTTTTTTGAACTGCTTGAATATCACTTTCTTACTCTCATTTGTCACATATCGATTTTGGTTCTTGCCCTGTTGTTTTTGTGGTCCAATGCTCATACCTTTCTTCATAAGACTCCACCTCACATTCCAGTGGTTCATCTACCAGAGGAACCATTTTTGCAAATTGCATCTGCATTGAGGATTGAAATCAACCGAGGATTTGCTGTCTTGCATAATATTGGTTCTGGAAGAGATTTGAAGCAATTCTTCATTGTTGTTTTTGGCTTGTGGATTGTATCAATTGTGGGGAGCTGGAGCAATTTCTTGACCCTGTTCTACATAACTTTCGTTTTGTTGCACACTGTTCCTTTCGTGTATGATAAGTATGAGGACAAGATAGACCCTCTGGCCGAAAAAGCATTCATTGAGATTAAAAAGCAGTATGCAGTTTTTGATGAAAAGGTCTTAAGTAAGGTCTTGAGTAAGATTCCAAAAGGTGTGTTGAAAGGCAAGTTAGCTTAG 792 0.4129 MADVSESTVTAVSRDGDSLLEKITEKLHFDDSSSDSSDSHSEADKPVVESVKEKVFRLFGREKPVHSVLGGGKPADVFLWKNKKISAGTLGVATAIWVFFELLEYHFLTLICHISILVLALLFLWSNAHTFLHKTPPHIPVVHLPEEPFLQIASALRIEINRGFAVLHNIGSGRDLKQFFIVVFGLWIVSIVGSWSNFLTLFYITFVLLHTVPFVYDKYEDKIDPLAEKAFIEIKKQYAVFDEKVLSKVLSKIPKGVLKGKLA 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01096 263 ProSiteProfiles Reticulon domain profile. 74 263 IPR003388 -
Trre15g01096 263 PANTHER RETICULON 41 249 - -
Trre15g01096 263 Pfam Reticulon 75 230 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01096 Trre-Chr15 8508030 8510027 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01096 - - mtr:25500807 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01096 15 8508030 8510027 Trre1g05324 1 59118191 59120419 ECH
Trre15g01096 15 8508030 8510027 Trre15g01096 15 8508030 8510027 ECH