Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05508 ATGGCTGATCATCAAGAACACGAAGAAGTTAAGAGTGAATCTTTGTTGGAGAAGATTTCAGGAAAACTCCATGACCATGATTCTTCATCTTCATCTGATTCAGACAACGAGAAAGAGAAAAAGACATCTTCTCCTACTTCCATTAAGAACAAGGTTTTCAGGCTTTTCGGCAGAGAAAAACCTCTTCACAATGTTCTTGGTGGTGGAAAACCTGCTGATGTTTTTCTATGGAGAAATAAGAAGATATCAGCAACAACCCTTGGAGTGGCAACAGCTTTATGGGTTCTGTTTGAATTACTTGAATACCACCTCTTGACTTTGATTTCCCACTTAGCAATACTTGCTCTCGCGGTGTTGTTCTTGTGGTCAAATGCGTCTACTTTCATCAACAAGTCTCCACCAAAGATCCCACAGGTGCACATTCCTGAGGAGCCTGTTTTACAGATTGCCTCTGCTATTAGAATTGAGCTCAATCGGGCTTTTGCTCTATTAAGGGATATTGCTTCTGGCAGGGATCTCAAGAAGTTTCTCTCAGTGATTGCTGGATTATGGGTTTTGTCCATTGTTGGGGGTTGGGCCAACTTCTTGACATTGTTCTACATAGCTTTTGTTTTACTTCACACTGTACCTGTGCTCTATGAGAAGTACGAAGATCGGGTGGACTCTTTTGGTGAGAAGGCACTTGCTGAGTTCAAGAAGCAGTATGCTGTGTTTGATGAAAAGGTTTTGAGCAAGATTCCCAAAGGACCTTTGAAAGACAAAAAGAAAGATTGA 774 0.4134 MADHQEHEEVKSESLLEKISGKLHDHDSSSSSDSDNEKEKKTSSPTSIKNKVFRLFGREKPLHNVLGGGKPADVFLWRNKKISATTLGVATALWVLFELLEYHLLTLISHLAILALAVLFLWSNASTFINKSPPKIPQVHIPEEPVLQIASAIRIELNRAFALLRDIASGRDLKKFLSVIAGLWVLSIVGGWANFLTLFYIAFVLLHTVPVLYEKYEDRVDSFGEKALAEFKKQYAVFDEKVLSKIPKGPLKDKKKD 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05508 257 PANTHER RETICULON 43 247 - -
Trre7g05508 257 ProSiteProfiles Reticulon domain profile. 71 257 IPR003388 -
Trre7g05508 257 MobiDBLite consensus disorder prediction 21 45 - -
Trre7g05508 257 Pfam Reticulon 72 226 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05508 Trre-Chr7 60834001 60835956 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05508 - - gmx:100811024 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05508 7 60834001 60835956 Trre7g05508 7 60834001 60835956 ECH
Trre7g05508 7 60834001 60835956 Trre1g05324 1 59118191 59120419 ECH