Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04605 ATGGAGAAGGTGATGAGGTTGGCTACAGAAAAGGGAGTGGTGATTTTCACAAAGAGTTCTTGTTGTCTATGTTATGCAGTGAATGTTCTGTTTCAAGAAGTTGGAGTGTTCCCTGTGGTTCATGAAATTGACCAAGATCCTGATGGCAAAGAAATGGAGAAAGCTATAAAAAGGTTGGGATGTAATGCACCTGTCCCTGCAGTATTCATAGGAGGAAGACTTGTGGGGTCCACTAATGAAGTAATGTCCCTCCACTTAAGTGGTTCACTCATTCCACTATTGAGGCCATATACTAGAATGTAA 303 0.4158 MEKVMRLATEKGVVIFTKSSCCLCYAVNVLFQEVGVFPVVHEIDQDPDGKEMEKAIKRLGCNAPVPAVFIGGRLVGSTNEVMSLHLSGSLIPLLRPYTRM 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04605 100 FunFam Glutaredoxin family protein 1 100 - -
Trre1g04605 100 SUPERFAMILY Thioredoxin-like 1 96 IPR036249 -
Trre1g04605 100 Gene3D Glutaredoxin 1 99 - -
Trre1g04605 100 Pfam Glutaredoxin 13 75 IPR002109 -
Trre1g04605 100 PANTHER GLUTAREDOXIN 1 95 IPR011905 -
Trre1g04605 100 CDD GRX_GRXh_1_2_like 13 93 - -
Trre1g04605 100 ProSiteProfiles Glutaredoxin domain profile. 1 100 - -
Trre1g04605 100 NCBIfam glutaredoxin-like family 4 96 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04605 Trre-Chr1 52138542 52138844 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04605 1 95 Miscellaneous Gene Families AT4G15670 51.579 4.66e-35 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04605 K03676 - vvi:100247747 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g04605 1 52138542 52138844 Trre1g04605 1 52138542 52138844 ECH
Trre13g04683 13 53911370 53911681 Trre1g04605 1 52138542 52138844 PCT
Trre1g04605 1 52138542 52138844 Trre13g04686 13 53928892 53929200 PCT