Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03377 ATGAATTCACTTGAAGAATTCAACTCATCATCAAATAGAGAAAAAAACATCATCAACTTCACAAACACAACCTCTGAAGAAAAAAACCTAACAAATTTCGCATCTTTAACTTCATCTTCTTCATCAGCACCACCGGCAACAAATACTTTAAGTCGGTATGAGAATCAAAAAAGACGCGACTGGAATACTTTCGGACAATATCTCCGAAACCATCGACCTCCATTATCACTCTCACGTTGTAGTGGAGCACATGTTCTTGAATTTTTAAGGTATTTAGATCAGTTTGGAAAAACTAAGGTTCATTCACAGATTTGTCCATTTTTTGGTCATCCAAATCCACCTGCACCTTGTCCTTGTCCTTTAAGACAAGCTTGGGGAAGTCTTGATGCATTGATTGGAAGATTAAGAGCTGCTTTTGAAGAAAATGGTGGGAAACCTGAAGATAACCCTTTTGCAGCAGCAGCCACCACCACCATCAAATGGAACTTAGTTAAAGTTGTGGACTGTGGTTTGAGATTGAGTGACTGTTGGGAAGGATACTCTTTGGAGTTGGGAGATGAATTTCTGGAGGATGAGGCGGTGGTGGTGGCTGAGGAGTTTTGTTTGTGTGGACTAAATGGTTGTTGA 627 0.4003 MNSLEEFNSSSNREKNIINFTNTTSEEKNLTNFASLTSSSSSAPPATNTLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHSQICPFFGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEDNPFAAAATTTIKWNLVKVVDCGLRLSDCWEGYSLELGDEFLEDEAVVVAEEFCLCGLNGC 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03377 208 ProSiteProfiles ALOG domain profile. 52 155 IPR006936 -
Trre1g03377 208 PANTHER PROTEIN G1-LIKE2 29 155 IPR040222 -
Trre1g03377 208 Pfam ALOG domain 40 156 IPR006936 -
Trre1g03377 208 MobiDBLite consensus disorder prediction 35 52 - -
Trre1g03377 208 MobiDBLite consensus disorder prediction 35 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03377 Trre-Chr1 30002830 30004990 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03377 - - zju:107422848 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g03377 1 30002830 30004990 Trre1g03377 1 30002830 30004990 ECH
Trre1g03377 1 30002830 30004990 Trre13g05269 13 57816231 57816734 ECH
Trre13g03980 13 47952747 47953752 Trre1g03377 1 30002830 30004990 ECH
Trre1g03377 1 30002830 30004990 Trre13g03980 13 47952747 47953752 ECH