Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g02824 ATGGATTCATCAATTCAAGATTTTATGGACTCATGTAACTCTGACAACAGTTGCAGCCTCACCAACAACAGCACCATCACTACCAACACCATCAGCAACACTTTAGTTGGTAGCTCTTCACCTTCTGGTTCTACCACCACAAGTAGCCGCTATGAAAACCAGAAACGCCGTGACTGGAACACTTTTGGACAATATCTCAAGAATCACCGCCCTCCTCTCTCCCTCTCCAGATGTAGCGGTGCACATGTTCTTGAATTTCTCCGGTACTTGGACCAATTTGGAAAGACAAAAGTGCACACACCAATTTGTCCATTCTATGGACACCCAAACCCACCAGCACCATGTCCATGTCCATTAAGACAAGCTTGGGGTAGTCTTGATGCACTCATAGGTCGTTTAAGGGCAGCTTTTGAAGAAAATGGAGGAAAACCAGATACAAATCCATTTGGTGCTAGAGCTGTTAGACTTTACCTTCGCGAGGTTCGCGATCTTCAATCGAAAGCAAGGGGTATTAGTTATGAGAAGAAGAAAAGAAAGCGTCCACCACAACAACAACAGCAGCAACAACAACAACAGCAACATCAACATCAACAATTGCCAATGCAATTGCCTCTTCATCTTCATCATCACCACCAACATCAGCTTCCACCTCCAGGTGCAACTCAATAA 669 0.4454 MDSSIQDFMDSCNSDNSCSLTNNSTITTNTISNTLVGSSSPSGSTTTSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPDTNPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPQQQQQQQQQQQHQHQQLPMQLPLHLHHHHQHQLPPPGATQ 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g02824 222 MobiDBLite consensus disorder prediction 183 200 - -
Trre1g02824 222 MobiDBLite consensus disorder prediction 31 50 - -
Trre1g02824 222 ProSiteProfiles ALOG domain profile. 50 177 IPR006936 -
Trre1g02824 222 MobiDBLite consensus disorder prediction 31 54 - -
Trre1g02824 222 PANTHER PROTEIN G1-LIKE2 36 196 IPR040222 -
Trre1g02824 222 MobiDBLite consensus disorder prediction 168 202 - -
Trre1g02824 222 Pfam ALOG domain 44 163 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g02824 Trre-Chr1 23382860 23384050 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g02824 - - gmx:100803605 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g05269 13 57816231 57816734 Trre1g02824 1 23382860 23384050 PCT
Trre1g02824 1 23382860 23384050 Trre13g03980 13 47952747 47953752 PCT